Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02556 ATGTCTGGAATCGTGGTTGTTTTCGACTTTGACAAGACCATTGTCGATGTCGACAGCGACAACTGGGTCATCGACGAATTGGGTTTCACCGATTTGTTCAACCAGCTTCTTCCCACCATGCCTTGGAACACTCTCATGGACACAATGATGATGGAGCTTCATTCAAAGGGTAAAACCATTAACGACATTGAAGAGGTTCTGCAGAAGATTCCCTTGCACCCAAGAGTGATACCTGCGATTAAAGCAGCTCATGATTCAGGATGTGATTTGAGGATTGTGAGTGATGCAAACACGTTTTTCATTGAGACTATTTTGAAGCATTTGGGAATCAGAGAGTATTTCTCAGAAATCAATACGAACCCCGGGTATGTGAACGAAGAAGGAAGGTTAAGGATTCTGCCTTACCATGACTTCAACAAAGCTTCCCATGGCTGCAGTTTGTGCCCTCCAAACATGTGCAAGGGTTTAGTGATAGAGAGGATCCAAGATTCAATATCAGAAGAGAATAAGAGGTTCATCTATCTTGGAGATGGCGTTGGAGACTATTGCCCAAGTTTGAGGCTGAAAGAGAAGGACTTTATGATGCCAAGGAAGAACTTTCCGGTGTGGGACTTGATATGCAAAGACCCTTCACTTGTTAAGGCTGAGATTCATGGGTGGAGTGATGGAGAAGAACTTGAGCAAGTTTTGGTGTACTTGATCAACAAAATATCAACGGACCAGAATTCTCCCTTCATTTCCTCTGATTGCAAGCTTCAGACTCTGTCAGTTTCTGCTATGGAGGCTTTGCCCAAAGTTCTACCAGTTCGGCCATAG 816 0.4387 MSGIVVVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNTLMDTMMMELHSKGKTINDIEEVLQKIPLHPRVIPAIKAAHDSGCDLRIVSDANTFFIETILKHLGIREYFSEINTNPGYVNEEGRLRILPYHDFNKASHGCSLCPPNMCKGLVIERIQDSISEENKRFIYLGDGVGDYCPSLRLKEKDFMMPRKNFPVWDLICKDPSLVKAEIHGWSDGEELEQVLVYLINKISTDQNSPFISSDCKLQTLSVSAMEALPKVLPVRP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02556 271 PIRSF PLP_phosphatas_PHOSPHO2 1 238 IPR016965 GO:0016791
Viun10g02556 271 Gene3D - 2 188 IPR023214 -
Viun10g02556 271 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 241 IPR016965 GO:0016791
Viun10g02556 271 NCBIfam MtnX-like HAD-IB family phosphatase 4 198 IPR006384 GO:0016791
Viun10g02556 271 NCBIfam HAD-IB family phosphatase 5 186 - -
Viun10g02556 271 SUPERFAMILY HAD-like 4 189 IPR036412 -
Viun10g02556 271 Pfam Putative Phosphatase 4 233 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02556 Viun-Chr10 39389209 39391089 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02556 K13248 - gmx:100785878 502.286