Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02522 ATGGATCACTATGGTTCTTCTGGAGGAACCTGGACCATGATCCCAACTCACAATTCAAATGTCCAATCCCAATCCCAATCGAACCAGGACCCTAACCTTTTTCTTCAACAACAACAACAACAACAACAATTTATCCAACCACAACCTTTTCAGCAAACACTACAACCTCAATCTCCATTTCAACAGCACCAGCACCTTTATCAGCAGCAACAACAGCAGCAACGTCTACTACAACAGCAACAGCAACAACAGCAACAGCAGAACCTTCACCAATCACTCGCCTCTCACTACCATCTCTTACATCTGGTGGAGAATTTGTCTGAGGTTATTGAACATGGAAACCCAGATCCGCAATCAGATGCATTGATCAATGAATTGAGTAACCACTTTGAGAAGTGCCAGCAACTGTTAAACTCAATCTCGGACTCGATTAGCACCAAGGCTATGACAGTTGAGGGACAGAAGAAGAAGCTAGAGGAAAGTGAGCAATTGCTAAATCACAGAAGAGACTTGATTGCCAATTACAGAAAATCTGTGGAGGAGCTTGTTAGGTCTGAGCCATAA 564 0.4326 MDHYGSSGGTWTMIPTHNSNVQSQSQSNQDPNLFLQQQQQQQQFIQPQPFQQTLQPQSPFQQHQHLYQQQQQQQRLLQQQQQQQQQQNLHQSLASHYHLLHLVENLSEVIEHGNPDPQSDALINELSNHFEKCQQLLNSISDSISTKAMTVEGQKKKLEESEQLLNHRRDLIANYRKSVEELVRSEP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02522 187 Coils Coil 67 87 - -
Viun10g02522 187 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT-RELATED 1 187 IPR038790 GO:0016592
Viun10g02522 187 MobiDBLite consensus disorder prediction 9 30 - -
Viun10g02522 187 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02522 Viun-Chr10 39153538 39156030 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02522 - - gmx:100803884 222.631