Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02512 ATGACCATGTTCATCTCTACCATTTCTCTGTTCACTCTCTTTTCTGCCATTTATGGCACTGCAGCTACCAATCTTCACACTTTTTCTTCTGATTCTTATAATCAACCTTACAGAACAGCTTATCACTTCCAACCTCCAAAGAATTGGATTAATGATCCAAATGGACCATTGAGATATGGAGGACTTTATCATCTGTTCTATCAGTACAATCCTAAAGGTGCAGTTTGGGGAAATATTGTGTGGGCACATTCAGTGTCAAAGGATCTTGTGAACTGGACCCCACTGGATCCTGCAATCTTCCCATCTCAGCCGTCGGATATAAATGGTTGTTGGTCAGGATCAGCCACAGTGTTACCTGGTAATAAACCAGCAATTTTATACACTGGAATCAACCCACTGAATCAGCAGGTTCAAAACATGGCAAAGCCTAAAAATTTGTCTGACCCTTTTCTCAGGGAATGGGTGAAGTCCACAAAAAACCCTCTAATGGCACCAACTAGTGCTAATGAGATCAATTCAAGTTCATTTAGGGATCCCTCCACTGCTTGGCTAGGTCAAGATGGACACTGGAGAGTGCTTGTTGGAAGCAAAAGAAGAAGTAGGGGAATGGCACTTTTGTATAGAAGCAAAGATTTTTCTGATTGGGTTCAAGCCAAACACCCTCTGCATTCAACCCTAGGCAGTGGAATGTGGGAATGTCCAGATTTTTTCCCAGTTTTGAAGAATGGCCAATTGGGTGTTGACACATCAGTGAATGATGATTATGTGAGGCATGTGCTTAAGGTTAGTTTGGATGATAAAAAACATGATTACTACATGATTGGGAGTTACAATGGTGCCAGAGATAGGTTTATCCCTGATAAAGGGTTTGAAGAATTTGTTTTAAGATATGATTATGGAAAATACTATGCCTCAAAAACCTTCTTTGATGATGGAGAGAAGAGAAGGGTTTTGCTTGGGTGGGTGAACGAATCTTCAAGTGTTGCTGATGATATCAAGAAAGGATGGTCTGGAATCCATACAATTCCAAGGGCTATTTGGCTGCATAAATCTGGTAAACAATTGGTACAGTGGCCAGTGGAGGAAATTAAAAAGCTGCGAGAAAAACCAGTTAACTTGTCACCCCAAACCTTAAAAGGAGGCAAATTTCTTCAAATTAATGGTGTCACAGCAACACAGGCTGATGTTGAAATTTCATTTGAAGTGAGTGAATTGGGAAGGGCTGAAAAATTGAAGTATTGGACTGACCCCCAAATTCTGTGTAGCAGAAAGGGTTCTTCATCCCTCAGAAGTGGATTGGGTCCTTTTGGTTTGCTGGTTTTTGCTTCAGAGGGATTGCAAGAGTTCACATCAGTTTTCTTCACAATATTCAGATACCAACAAAAATATTTGGTACTCTTGTGCAGTGACCAGAGCAGGTCTTCCTTAAATAAGAACAATGATTTGACCACTTATGGAACTTTTGTAGACGTGAATCCTCTTAAGGAGAAGTTATCATTGAGAACCTTGGTTGATCATTCAGTAGTAGAGAGTTTTGGAGGAGAAGGAAGAGGGTGCATCACTGCCAGAGTTTATCCAACATTAGCAATAAATGATAAAGCACAAATATATGCTTTCAATAATGGTACTGCAGATGTCAAGATTACAAGATTCAGTGCTTGGAGCATGAAAAAAGCACACATAAAGTGA 1689 0.4014 MTMFISTISLFTLFSAIYGTAATNLHTFSSDSYNQPYRTAYHFQPPKNWINDPNGPLRYGGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDPAIFPSQPSDINGCWSGSATVLPGNKPAILYTGINPLNQQVQNMAKPKNLSDPFLREWVKSTKNPLMAPTSANEINSSSFRDPSTAWLGQDGHWRVLVGSKRRSRGMALLYRSKDFSDWVQAKHPLHSTLGSGMWECPDFFPVLKNGQLGVDTSVNDDYVRHVLKVSLDDKKHDYYMIGSYNGARDRFIPDKGFEEFVLRYDYGKYYASKTFFDDGEKRRVLLGWVNESSSVADDIKKGWSGIHTIPRAIWLHKSGKQLVQWPVEEIKKLREKPVNLSPQTLKGGKFLQINGVTATQADVEISFEVSELGRAEKLKYWTDPQILCSRKGSSSLRSGLGPFGLLVFASEGLQEFTSVFFTIFRYQQKYLVLLCSDQSRSSLNKNNDLTTYGTFVDVNPLKEKLSLRTLVDHSVVESFGGEGRGCITARVYPTLAINDKAQIYAFNNGTADVKITRFSAWSMKKAHIK 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02512 562 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 29 560 - -
Viun10g02512 562 Gene3D Glycosyl hydrolase domain; family 43 46 370 IPR023296 -
Viun10g02512 562 SUPERFAMILY Concanavalin A-like lectins/glucanases 359 559 IPR013320 -
Viun10g02512 562 Pfam Glycosyl hydrolases family 32 N-terminal domain 42 359 IPR013148 -
Viun10g02512 562 SMART glyco_32 42 516 IPR001362 GO:0004553|GO:0005975
Viun10g02512 562 ProSitePatterns Glycosyl hydrolases family 32 active site. 42 55 IPR018053 GO:0004553|GO:0005975
Viun10g02512 562 Gene3D - 371 556 - -
Viun10g02512 562 Pfam Glycosyl hydrolases family 32 C terminal 362 555 IPR013189 -
Viun10g02512 562 SUPERFAMILY Arabinanase/levansucrase/invertase 32 360 IPR023296 -
Viun10g02512 562 CDD GH32_Fruct1-like 48 348 - -
Viun10g02512 562 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 46 371 - -
Viun10g02512 562 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 371 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02512 Viun-Chr10 39101884 39105455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02512 59 561 Glycoside Hydrolase AT3G13790 62.963 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02512 K01193 - gmx:100777339 1004.97