Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02501 ATGGCATCTCAAGGTTTGTGTCCTTTGATAAAAAATATTCTTCTTTTGGACTCTGAAGGGAAGCGTGTGGCAGTCAAGTATTACTCAGATGACTGGCCGACAAACAATTCAAAGTTAGCTTTTGAGAAGTTTGTATTTAGTAAGACTGTTAAGACAAATGCTCGTACAGAAGCTGAGGTAACACTACTTGAGAACAATATCATCATTTACAAATTTGTACAAGACTTGCATTTCTTTGTTACTGGTGGTGATGATGAAAATGAGCTCATTTTAGCATCAGTACTTCAAGGTTTCTTTGATGCAGTCACCCTTCTATTGAGGAGCAATGTTGACAAAAGAGAGGCACTTGAGAACTTGGATCTCATTCTGTTGTGTCTTGATGAGATTGTTGATGGAGGGATGATACTTGAAACAAATGGAACTCTTATTGCTGAAAAAGTGACCTCTCATAGCTTGGATGCTGATGCCCCATTGTCAGAGCAGACACTAACTCAAGCTTGGGCTACAGCCAGAGAACATTTGACAAGAACCCTTTTAAAATGA 543 0.3886 MASQGLCPLIKNILLLDSEGKRVAVKYYSDDWPTNNSKLAFEKFVFSKTVKTNARTEAEVTLLENNIIIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTLLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGTLIAEKVTSHSLDADAPLSEQTLTQAWATAREHLTRTLLK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02501 180 CDD Zeta-COP 11 146 - -
Viun10g02501 180 Gene3D - 5 150 - -
Viun10g02501 180 PANTHER ZETA-COAT PROTEIN 6 179 IPR039652 GO:0006890|GO:0030126
Viun10g02501 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
Viun10g02501 180 SUPERFAMILY SNARE-like 10 151 IPR011012 -
Viun10g02501 180 FunFam Coatomer subunit zeta-2 4 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02501 Viun-Chr10 39020495 39024294 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02501 K20472 - gmx:547466 332.028