Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02460 ATGGGAGATCCATCAGTTAGTGTGAACGTTGAAGGTGAGAAGGAGGAGACAAAAGGGTGGAGAAACGGTGTGAAAAAGGTAGGAAATTGGCTGAAGCATAGGGATAAAGATGAATTGATGAAGGACATGAGGGGTAACCTGAGTTTGGTGGCGACGGTAATCGCAACAATTACCTTTCAAAGTGCTCTAAATCCACCAGGTGGCGTTATACCGGCAAAAGAGGGTGGTGGAGGACCGGTGGTTTGTGAAGGTGATGATGATCAGAGACATCCATGTCCTGGAGAATCTGTCTTGGCTTATGCATTTACACAGGATTATACCTACTTCCTTATTTGGAACACAACATGTTTCATATCATCCTCTGCTGTTTGTCTCTTGCTGGTTAGTGGATTCCCTCTAAACCACAGATTTTTCACCTGGCTTTTGTCAATCGGCATGTGCATCACCATCACTAGTCTTGCTCTAACCTACATGTTTGGTGCTACACTCGTTACCCCTGATCCTGTTTGGTATAAATCCTCCTCCATGTTTCAAAATGTTTTTTATATTTGGATAACGCTGCTAGGACTCGTTGCTCTTCTTCTTTGCCTGCGTTTCTTTGTTTGGATTCTCACTAAATGGATTACCAGACCCAAACACTGA 642 0.4361 MGDPSVSVNVEGEKEETKGWRNGVKKVGNWLKHRDKDELMKDMRGNLSLVATVIATITFQSALNPPGGVIPAKEGGGGPVVCEGDDDQRHPCPGESVLAYAFTQDYTYFLIWNTTCFISSSAVCLLLVSGFPLNHRFFTWLLSIGMCITITSLALTYMFGATLVTPDPVWYKSSSMFQNVFYIWITLLGLVALLLCLRFFVWILTKWITRPKH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02460 213 PANTHER CASKIN 33 205 - -
Viun10g02460 213 Pfam Domain of unknown function 39 163 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02460 Viun-Chr10 38667384 38668952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02460 38 166 Miscellaneous Gene Families AT1G34050 27.273 2.46e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02460 - - vra:106773979 306.605