Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02420 ATGGGTTCTCGAGGAAGGCCATTATTTGATCTCAATGAACCGCCTGCAGAGGATAATGATGATAGAGATGGTATTGTCTGCATCCAGCCCCAAAAGACACTCCCCTCGACAAATCCCCATGCTTCTGATTTATTTGCAACATCAACTGCAGCCCAAGGAATAATAAATAATCATGCTTTTTCACATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCTAAATTCACTGGTGTGCCTGAACCAGATGCTGAATTGAAGAAAGCAGGAGATCAGGACACAAAGGTTTCCTCAAAGTCAAGTAAAGATGAAGATGTGAAGGTTATAGATTCACGGATACAAAGTTCAGCAAATGCCCAACCTATTGAGAGGGAAGAAGGGGAATGGTCTGATGAGGACGTCTTTGCTAATGCTAATGGAGGTAATAATGCTAATTCAAATGGAGGTAGTAATGCTAATGCAAATGTAGGGAATAATTTGGCACAGCGAAGTCAAGCTTCAGAAGAGGTAGCAACATCTGGAATGGTGGATGGGGGTGTTGTGGTTGCTTCTGACTGTAAGCCTAGAAATCTTAAAAGTTCTGATAGTATAAATGATGAAAAGGGTAGTCATACTTCTATAGGTCTAGAATCAAATTCGAGTGAGCAGAAAAGCAATAGTATTCCAAATTCAGAAAGCAATATAAAAAGTGAAACCTCTACAGATGCACTGGAGGAACCCACTTTAGTTCCCAAGCAAAAAGAAGTGAAAGGTATTGAAGCAAGTCACGCACTTAGGTGTGCAAATAATCCAGGGAAGAGGAAGATTGACCAACGGAAAGAGGAAATGTTGGGAAAGAAACGTAATAGACAGACAATGTTTCTTAACTTAGAGGATGTTAAGCAAGCAGGTCCTATTAAAACCTCAACCCCTAGAAGGCAGAATTTCTCGTCATCTGTTGTAAGTCGTACAATAAAGGAAGTCCGCACTATTCCTGCACAAGTTGAGCGTGTTGGAATTGCTAAGGATCAGAAGCTCACTGAGACTACTTCTGGTGAAGGTGGCAACCATGCTGATGCACATGAACCTAAATCTGATTCTAATGGCGATACTACAGGACCACTTGTTAGATCCAGGAGGTTAAACAGTGAAACAGAGCCTCCTGCAGAGGCCAATTTACCACCCATTCCAAGACAGGGTTCATGGAAACAATTGACAGATTCAAGGCAGCAGAAAAACACTATTCATTCTAATAGGAAGTTGGGATTGAGTGGTCAAAGTTCCAATGATGTTAAATTAGGAAACAAGAAGCATCTTTCTATCAAGAAGCAGACTCCTATCAGCAACCAGTCCCAGGACACATCTGTTGAACGCCTTATACGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGAGGATACTGAGCTTCAGTGTGTCCCTGGACGGTTTGAATCAGTGGAAGAGTATGTTAGAGTATTTGAGCCTTTGCTTTTTGAGGAATGCCGTGCTCAACTTTACAGTACTTGGGAAGAGTCAACAGAAACAGTGTCAAGGGATACTCATATTATGGTGCGAGTGAAGGCGAATGAGTCGAGGGAAAGAGGGTGGTATGATGTGAAAGTTCTTCCTGTACATGAGTTCAAGTGGTCATTTAAGGAGGGTGATGTTGCAATTCTTTCATCCCCCAGGCCTGGATCAGTTAGATCCAAGCAGAACAATTCATCTGTAGCTCAGGATGATGGGGAATCAGAAGTCACTGGACGAGTGGTCGGCACGGTTAGGCGGCACATACCTATTGATACCCGTGATCCTCCTGGTGCTATTCTTCATTACTATGTTGGAGACTCTTATGATCCCAGCAGGGTTGACGATGACCATATCATAAGAAAGCTTCAAAGTGGAAGCATATGGTACCTCACCGTTCTTGGTTCTCTTGCTACCACACAAAGGGAGTATGTTGCCCTACATGCATTTCGTCGACTAAATTTGCAGATGCAAACTGCAATCCTTCAGCCTAGTCCCGAACACTTCCCTAAATATGAGCAACAGACCCCAGCCATGCCTGAATGCTTCACACAGAACTTTGTTGAGTATCTACGTAGGACCTTCAATGAACCCCAGTTGGCAGCAATCCAATGGGCTGCTACGCACACAGCTGCTGGCACAAGTAGTGGATCAACAAAAAGGCAAGAACCTTGGCCATTTACCCTCGTTCAAGGACCTCCAGGAACAGGAAAAACACATACAGTGTGGGGAATGTTGAATGTCATTCACCTTGTTCAGTATCAGCACTACTACACCTCTTTACTAAAGCATGTGGCCCCTGAGAGCTACAAGCAAGTCAATGAGATTAATTCAGATCATGTACCCACTGGATCTATCGATGAAGTTCTTCAAAACATGGACCAGAATCTCTTGCGAACCTTACCTAAACTGGTCCCAAAACCTAGAATGTTAGTCTGTGCTCCATCTAATGCTGCCACTGATGAGCTTCTTGCTCGTGTTCTGGATCGTGGATTTATTGATGGGGAGATGAAAGTTTATCGACCAGATGTGGCTCGAGTAGGGGTTGATTCTCAGACACGTGCTGCACAAGCAGTTTCTGTTGAGCGCAGAACTGAACAGCTTTTAATCAAGAGTCGGGAAGAAATTATGGGATGGATGCACCAGTTAAAGAATCGTGAGGCACAGTTGACTCAGCAGTTGCATTGTCTCCACAGAGATCTTAATGCTGCTGCCGCTGCTGTTCGTTCCCAAGGATCTGTTGGTGTTGATCCTGACCTTCTCATGGCCCGAGATCAGAATCGAGATGCTTTGCTACAAAGCCTTGCTGCTGTGGTTGAAAACCGGGACAAGGTTCTGGTTGAGATGTCTCGCCTAGCTCTTCTTGAAAGTAGGTTTCGACCTGGTAGTGGATTTAATTTGGAAGAAGCCCGTGCTAGTTTAGAGGCCAGTTTTGCAAATGAAGCAGAGATTGTTTTTACTACAGTTTCTAGCAGTGGCCGGAAGTTGTTTTCTCGCCTTTCCCATGGTTTTGATATGGTGGTCATTGATGAGGCAGCCCAAGCCAGTGAGGTGGCAATTCTGCCTCCCCTCTCTCTCGGTGCAGCTCGGTGTGTTCTTGTTGGAGATCCTCAGCAGCTTCCTGCTACAGTTATAAGCAAGGCTGCTGGAACATTGATGTACAGTAGGAGTCTTTTTGAAAGGTTCCAACAAGCAGGTTGCCCGACAATGTTGTTGTCCGTGCAGTATAGAATGCACCCTCATATTCGGGATTTCCCTTCTAGGTACTTCTATCAAGGGCGGCTTACCGATAGTGAAAGTGTGGCTAAACTTCCTGACGAGCCATACTACAAGGACCCTTTACTTAAACCTTATATATTCTATGATATCAGACATGGGCGCGAGTCTCACAGAGGTGGATCAGTCTCTTATCAAAACATACATGAAGCACAATTTTGTCTCAGATTGTATGAGCATGTTCAGAAAACAGTCAAGTCTTTGGGTCTAGGAAAAATTACTGTTGGCATAATTACTCCATATAAGCTGCAATTGAAATGCCTCCAGCGTGAGTTTGACGAAGTCTTAAATTCAGAAGAAGGGAAGGATCTATATATCAATACAGTAGATGCTTTCCAAGGTCAAGAACGAGATGTCATTATAATGTCCTGTGTCCGTGCATCTAGTCACGGTGTTGGCTTTGTTGCAGATATTCGTCGGATGAATGTTGCCCTTACACGTGCAAGGAGGGCCCTTTGGGTCATGGGAAATGCGAATGCTCTGGTGCAATCTGAAGATTGGGCTGCATTGATTAATGATGCTAAATCTCGAAATTGCTATATGGACATGGACTCTCTTCCTAAAGACTTCCTGGTGTCGAAGGGACCTGTTTACACATCATTGCCCGGTAAGCCTTCAAATATGAGGGGCATGAGATCAGCTGGACCAAGATATAGAGCAATGGATATGCATATGATGGATTCCAGGTCGGGAGCACCATCTGAAGATGACGAGAATATGGGTGCTCCAATTGGCTCCAGAAACGGGAACCATCGCCATTCACGGTTTTCAATGGAGAATTCCGTAGATGATTTTGATCACGGGGGTGACAAAACAAGAGATACTTGGCAGTATGGTATACAGAAGAAGCAGAACTCATCTGGACCCATGGGAAAGAGAGACGTATAA 4173 0.4433 MGSRGRPLFDLNEPPAEDNDDRDGIVCIQPQKTLPSTNPHASDLFATSTAAQGIINNHAFSHASSVSGFQPFVRPKFTGVPEPDAELKKAGDQDTKVSSKSSKDEDVKVIDSRIQSSANAQPIEREEGEWSDEDVFANANGGNNANSNGGSNANANVGNNLAQRSQASEEVATSGMVDGGVVVASDCKPRNLKSSDSINDEKGSHTSIGLESNSSEQKSNSIPNSESNIKSETSTDALEEPTLVPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPIKTSTPRRQNFSSSVVSRTIKEVRTIPAQVERVGIAKDQKLTETTSGEGGNHADAHEPKSDSNGDTTGPLVRSRRLNSETEPPAEANLPPIPRQGSWKQLTDSRQQKNTIHSNRKLGLSGQSSNDVKLGNKKHLSIKKQTPISNQSQDTSVERLIREVTSEKFWHHPEDTELQCVPGRFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSVRSKQNNSSVAQDDGESEVTGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRVDDDHIIRKLQSGSIWYLTVLGSLATTQREYVALHAFRRLNLQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAATHTAAGTSSGSTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINSDHVPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLIKSREEIMGWMHQLKNREAQLTQQLHCLHRDLNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQSLAAVVENRDKVLVEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLKPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSEDWAALINDAKSRNCYMDMDSLPKDFLVSKGPVYTSLPGKPSNMRGMRSAGPRYRAMDMHMMDSRSGAPSEDDENMGAPIGSRNGNHRHSRFSMENSVDDFDHGGDKTRDTWQYGIQKKQNSSGPMGKRDV 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02420 1390 Gene3D - 630 1078 IPR027417 -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 77 315 - -
Viun10g02420 1390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 697 1282 IPR027417 -
Viun10g02420 1390 Pfam AAA domain 1057 1253 IPR041679 -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 333 426 - -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 559 576 - -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 301 315 - -
Viun10g02420 1390 Coils Coil 883 903 - -
Viun10g02420 1390 FunFam P-loop containing nucleoside triphosphate hydrolase 1079 1285 - -
Viun10g02420 1390 CDD SF1_C_Upf1 1081 1270 IPR047187 -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 201 240 - -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 557 580 - -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 81 111 - -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 1322 1390 - -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 137 172 - -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 264 288 - -
Viun10g02420 1390 Pfam AAA domain 698 1050 IPR041677 GO:0004386
Viun10g02420 1390 MobiDBLite consensus disorder prediction 1 23 - -
Viun10g02420 1390 CDD DEXXQc_SETX 698 1080 - -
Viun10g02420 1390 PANTHER DNA2/NAM7 HELICASE FAMILY 268 1329 IPR045055 -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 393 426 - -
Viun10g02420 1390 Gene3D - 1079 1285 IPR027417 -
Viun10g02420 1390 MobiDBLite consensus disorder prediction 1347 1372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02420 Viun-Chr10 38478773 38486802 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02420 - K10706 gmx:100794516 2506.86