Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02419 ATGGCGCTTACTTTCAGAACCCTCTTCCTCATGCTACTCGCAATCCTCTCTCTTCTCCTTTTCGAGGACTGGGTGTCAACGCCTTCTTGCAACAACACCGACAACATCGTCAACAACAACCTTAAAGTCATGATGGTCGCTGACCTCCTTCTCTCCGATTCCGGTTTCGTCAACCGCGTCTTCCGAGACTACTACATGTCAAAATTCTTTCGGAAATCGTTCGAGGTTCTGCGGCCCGATTTGCTTGTGGTGTTGGGCGACCTATCGGCGCGAGGCTCGGGGCTAACGAGGAGCAAGTGGGTGTCGTTGCTGCGGAGGTTTTACAGAGTGTTGGGCCCTTTTGTCGGGCTTCCGTTCCACGCCGTTCTCGGCGACAGAGACGTTGGAGAGTGTGGGGAGATTGATGCTGACAGGGTTAGTTGGATTGCGAACAAGTTTCCCGGGTTGGATTCCTCTGGCTGCGCTGCGTTTGAGATTGGGAATGTGAGTTTTGTCTCGCTGAACGCGGTGGCTCTGCTTTGCGGGGGGAGTGGTGGGTTGCGTTTTGAGGTGGAGAAGGTGATAGAAAGGGAGAGTGTGGGGGTTCACATGGGAACGGAGAGGGTGGTGAAGAGAGTGAATGGTTCTGGGGAGTTTGCAGATGAGGATGTTTTATCTGGGTCAGGACCTGTCGTTTTGCTGCACCTGCCGTTGGATCAAGCGAGGAATGAACGCTTTGGTTCGGTTGGTGATTTTGAGAAATATTGGAGTTCTTCCATGGATGGGTTAAATGTGGTGTCAGAAAGCAGGGGTGACCTGTATAAGTTGCTTCATACCCTTCCTCCGAATGCTTCTGAGTACATTTTACAAGCTCTGAAACCAAGGATTATTTTCAGTGGTCACAGTTATACATTCTCTGATCATGTTCATGGGGACAGAACTCGTGAGATTAGTGTTCCAGCAATGTCATGGAACGCAAGAGATGACCCTGGATTTGTGATTGCCTCTTTTCAAAAGACAGGAAGAGCAGTGAGCATAAGCCATTGTTCTCTTGCTAGGGAATCTCATATTCTTATAGTCTACATTTGTGTAATGTTATTGTTTTGTTTGGTGTGTTTAAAAGGATACTGGCATGGGAGTTTGTCATGTAGATTAAGGATTAGCCCTTATCCAGTAAAGGGTTTTTCAATTTTGAAGAAAGCAAGAGATTGTTTTGTTTGTGTTGTTCGAAAGCAAGGTTCTTCACCAAGATCGATTCTCCAGCCTTTCACACCTTCCTTCAATTCAACTCAGCTCTCTGCGCCTTCCCCTGCGCGCCCATGGCCGCATCATAGCAGCGATCAGTCCATCACATCAAAATCAATGGCGGAAAGCGCATCACCGTCGTCCAAACCCTCACCAATGGACCCTCAAAACCCCGCACCATCCTCCAACCCTACAATCCCTTCCCCTTCCCACAACAACATGCCTTCACCTTCGCTCCCTCCGCTTCCCCAAGACCAGCAACAGCAACAGCAGCAGCAAAATCTTCATCAACAGTTGAGTCCGCCTCAACAACAACAGCCTCTCGTGTCGTCGCAAGCCATGAACACCATCAACGGCATCAACCCTATCTCCAATTTCCAACTCCAGCAGACGCTGCAGCGATCGCCTTCCATCTCGCGCCTCAATCAAATCCAGCCTCAGCAGCAGCCGCAGCAGCAGCAGCAGTTCGGCGTCATGCGCCAGCAGGCCGGATTGTACGGCGGACAGATGAGCTTTGCTGCCGCGGGCGGCGGAGCGGGCCAGCAGCAGCAGTTGGGCGGCTCCAATTTGTCGCGGTCCGCGCTGATAGGGCAGAGCGGACACTTCCCCATGTTGTCTGGTGCTGGTTCGCAGTTTAACTTGCTCTCCTCGCCAAGGCAAAAAGGTGGGCTAGTTCAGCAGTCTCAGTTCTCAGGTAATTCTGCTGGACAATCTCTGCAAGGAATGCAAGCAATGGGTATGATTGGATCGTCAAATCTCACCTCTCAACTGCGAGCTAATGGAGCCCTTGCTTATGCACAGCAGCTTCGAATGAGTCAGGGTCAAATCAGACAGCAAATTTCTCAGCAGAGTTCACTTAACACTGGACAGGTTCAAGGTTTACCAAGGTCATCATCCCTTGCTTTTATGAACTCTCAGTTGTCTGGGTTGTCTCAGAATGGGCAACCAGCGATGGTTCATAACTCCTTAACACAGCAACAGTGGCTTAAGCAAATGCCAGGACTGTCTGGCCCTGCCTCACCATTGCGTCTTCAACAGCAGAGGCAGCAGTTGGCTTCTTCTACTCAATTGCAACAAAACTCTATGAGCCTGAACCAGCAACAATTGTCCCAGCTGATTCAGCAACAGAAATCGATGGGGCAGTCTCAGCTGCATCAGCAGCAACAGCAGCAACAGCCTCAACAGCTGCAACAGCAACTCATACATCAGCAGCCACAACAACAGTCTCAGCCACAGGCTTCTGTCCATCAACAGCAACAGTCTCCAAGGATGCCAGGACCTGCAGGCCAAAAGTCATTCAGTCTAACAGGATCACAGCCAGACGCTACTGCATCTGGTGCAACTACACCAGGTGGTAGTTCTAGCCAAGGAACAGAAGCAACGAACCAAGTTCTTGGGAAGAGAAAGATACAGGATTTAGTTGCACAGGTGGATCCACAAGGTACACTGGACCCCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGATTTCATTGATTCTACAACTACACACGGTTGCATTTTGGCAAAACATAGAAAATCATCAACTTTGGAGTCCAAGGATTTATTGCTACACCTAGAGAAAAATTGGGATTTAACAATTCCTGGATATTCAAGTGAAGAGAAGAAGTATCAAAGCAAACCTCAATTAAATGACCTTCACAAGAGGCGCCTAGATATGATTCGCACAATGATGGAATCTTCGGCCTCTGAGTCAAATATTAGTAGTTCTAAAGAGTTGAGTAGACAGGGCATTTCAAATCCTACCCCTGTGGGAGCTCACCATCTAGTAAGACCCATGAGTTCAGAGCAGTTGGTTTCTCATGCAGGTGGTTCTCAAATGCTACAGCAGATGACAAGGTTTTAA 3093 0.4898 MALTFRTLFLMLLAILSLLLFEDWVSTPSCNNTDNIVNNNLKVMMVADLLLSDSGFVNRVFRDYYMSKFFRKSFEVLRPDLLVVLGDLSARGSGLTRSKWVSLLRRFYRVLGPFVGLPFHAVLGDRDVGECGEIDADRVSWIANKFPGLDSSGCAAFEIGNVSFVSLNAVALLCGGSGGLRFEVEKVIERESVGVHMGTERVVKRVNGSGEFADEDVLSGSGPVVLLHLPLDQARNERFGSVGDFEKYWSSSMDGLNVVSESRGDLYKLLHTLPPNASEYILQALKPRIIFSGHSYTFSDHVHGDRTREISVPAMSWNARDDPGFVIASFQKTGRAVSISHCSLARESHILIVYICVMLLFCLVCLKGYWHGSLSCRLRISPYPVKGFSILKKARDCFVCVVRKQGSSPRSILQPFTPSFNSTQLSAPSPARPWPHHSSDQSITSKSMAESASPSSKPSPMDPQNPAPSSNPTIPSPSHNNMPSPSLPPLPQDQQQQQQQQNLHQQLSPPQQQQPLVSSQAMNTINGINPISNFQLQQTLQRSPSISRLNQIQPQQQPQQQQQFGVMRQQAGLYGGQMSFAAAGGGAGQQQQLGGSNLSRSALIGQSGHFPMLSGAGSQFNLLSSPRQKGGLVQQSQFSGNSAGQSLQGMQAMGMIGSSNLTSQLRANGALAYAQQLRMSQGQIRQQISQQSSLNTGQVQGLPRSSSLAFMNSQLSGLSQNGQPAMVHNSLTQQQWLKQMPGLSGPASPLRLQQQRQQLASSTQLQQNSMSLNQQQLSQLIQQQKSMGQSQLHQQQQQQQPQQLQQQLIHQQPQQQSQPQASVHQQQQSPRMPGPAGQKSFSLTGSQPDATASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGTLDPEVIDLLLELADDFIDSTTTHGCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKYQSKPQLNDLHKRRLDMIRTMMESSASESNISSSKELSRQGISNPTPVGAHHLVRPMSSEQLVSHAGGSQMLQQMTRF 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02419 1030 MobiDBLite consensus disorder prediction 459 490 - -
Viun10g02419 1030 MobiDBLite consensus disorder prediction 975 997 - -
Viun10g02419 1030 FunFam Transcription initiation factor TFIID subunit 12 868 943 - -
Viun10g02419 1030 Gene3D Histone, subunit A 868 943 IPR009072 GO:0046982
Viun10g02419 1030 MobiDBLite consensus disorder prediction 412 458 - -
Viun10g02419 1030 MobiDBLite consensus disorder prediction 791 872 - -
Viun10g02419 1030 MobiDBLite consensus disorder prediction 491 518 - -
Viun10g02419 1030 SUPERFAMILY Histone-fold 871 942 IPR009072 GO:0046982
Viun10g02419 1030 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 524 983 IPR037794 GO:0000124|GO:0005669|GO:0046695
Viun10g02419 1030 MobiDBLite consensus disorder prediction 975 1003 - -
Viun10g02419 1030 SUPERFAMILY Metallo-dependent phosphatases 39 334 IPR029052 -
Viun10g02419 1030 MobiDBLite consensus disorder prediction 412 518 - -
Viun10g02419 1030 Pfam Transcription initiation factor TFIID subunit A 874 941 IPR003228 GO:0005669|GO:0006352
Viun10g02419 1030 CDD TAF12 873 941 IPR003228 GO:0005669|GO:0006352
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02419 Viun-Chr10 38457656 38469536 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02419 K23362 - qsu:112038052 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02419 10 38457656 38469536 Viun10g02419 10 38457656 38469536 ECH