Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02415 ATGGCGGAGAGCGCATCACCGTCGTCCAAACCCTCACCAATGGATCCTCAAAACCCTGCAATCCCTTCCCCTTCCCACAAGAACACAGCTTCACCCTCGCTCCCTCTGCCCCCCGAAGAGCAGCAACAGCAACAGCAGTTGAACGTCCTCTCCTCGAGGAGAAACAGGGATAATACTGAAGGAAGCGCATCACATAACAGTGAACTGAAGACAATGTCTGCTGAATCGCCAAGTTCTATTCGTAAAGTGGTTGTTCATCTCAGAGCCACCGGTGATGCTCCTATTCTCAAACAATCCAAGTTCAAGATAGCAGGAACTGATAAATTCGTTAAAGTGATAGACTTTCTTCGCCGGCAACTCCACAGGGAGACAATGTTTGTGTATGTCAATAGTGCTTTTTCACCAAACCCTGATGAGTTGGTCATTGATCTGTTTAATTTGCTAATATTTCTCGCAAATGTAATATTTGTCTCATGTATGTTGTGA 486 0.4568 MAESASPSSKPSPMDPQNPAIPSPSHKNTASPSLPLPPEEQQQQQQLNVLSSRRNRDNTEGSASHNSELKTMSAESPSSIRKVVVHLRATGDAPILKQSKFKIAGTDKFVKVIDFLRRQLHRETMFVYVNSAFSPNPDELVIDLFNLLIFLANVIFVSCML 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02415 161 CDD Ubl_ATG12 82 146 - -
Viun10g02415 161 Gene3D - 70 149 - -
Viun10g02415 161 MobiDBLite consensus disorder prediction 21 57 - -
Viun10g02415 161 SUPERFAMILY Ubiquitin-like 81 147 IPR029071 -
Viun10g02415 161 MobiDBLite consensus disorder prediction 1 77 - -
Viun10g02415 161 PANTHER AUTOPHAGY PROTEIN 12 71 150 IPR007242 GO:0000045|GO:0005737
Viun10g02415 161 Pfam Ubiquitin-like autophagy protein Apg12 82 148 IPR007242 GO:0000045|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02415 Viun-Chr10 38421861 38427491 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02415 K08336 - gmx:100527905 142.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02415 10 38421861 38427491 Viun10g02415 10 38421861 38427491 ECH