Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02390 ATGGCAACTGCAACCATGGCTACTGCAGCAGGTGCAGCTGCCCTTCTGTATTACACATTGAACCGGAAATTGCAGACTCAGGATGCAATAGATGAAGATGCTGAAGAAAATGGAAGTGAAACGACTGATACGCCATTAGGCAGTGCTCGTATTTCTCATCCGTTAATCCAAGCCCCTGGAACCTGGTTAGAGACAATTTCAACGTTGTCTGAGACTCTCAGGTTCACGTATTCGGAGACGCTTGGGAAATGGCCAATTGGGGATTTGGCGTTTGGTATCAGCTTTCTGCTCAAGAGGCAGGGGAACTATCAAGTTGACAGTGAATTTTGTGGTAAGGATAGTGTACAGCTGAAAGGACCTGAGATTACTGCTGAACTTAAGTATCTCTTGAAGTTGTTGACCCTGTGCTGGCATTTTTCAAAGAAGCCCTTTCCCTTGTTTTTAGACGAGACTGGCTACACTGAAGAAAATGTTCTCCTTCGGGAAGCCAAAGCAGGAATTTTAAAACCAGCTTTTACAATAATTGTTGATCATGACATGAGATGCCTTTTGCTGTTGATTCGTGGCACACATAGTATCAAAGATACTCTAACAGCTGTTACGGGTAGTGTGGTACCATTCCATCACACTGTAGTTCACCAGGGGGGCGTTAGAGATTTGGTTTTAGGTTATGCCCACTGTGGAATGGTTGCTGCTGCTCGATGGATTTCAAAGCTTGCAACTCCTTGTCTCCTTGAAGCACTTGGCCACTACCCTGATTATAAAGTCAAGATTGTTGGGCACTCTTTGGGTGGAGGTACTGCAGCAATTCTAACTTATGTGTTGAGGGAGATAAAGGAACTGTCTGTCGCTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCGGGTGATAGTTTTATCACTTCTATTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTGTAGATGACTTGCGTTCTGAGGTGACAGCATCAGCATGGATAAATGACTTGAGAAATCAAATTGAACAAACAAGAATACTAAGTACTGTCTATCGTTCTGCTTCAGCATTGGGTTCTCGCCTCCCATCGATTGCCACTGCTAGAGCAAAAGTTGCTGGGGCTGGAGCCATTTTGCAGCCAGTTTCTAATGGTACCCAGGTTGTGATGAAGAGAGCCAAGAGTATGGCAGCATGGGCACGTCCAAACCTTAGTTTGTCCTCTTGGTCATGCATGGGACCCCGTCGCAGAGCCTTGAGTGCTTATTCAAACTCTAGAGACGGAGAAAGTTCTCCTACATCTTCCTCTACCAACATTGACTGTTCCGAATCACTTCTTCGTTCTCCCAAGAAGGCGATTAATGCAAAGAACATGAACCTTCCTGTATCTTCATCTATAGAAGAGTGGTCTTCTGAGATAGAATGTGCCAATGAAAGTAGTTCTGATACTGATGTGGACGTTGATCATGGTGACCGTCAGAACCTGATGGACCATGACAGATATGATGATCAGATGAGTGAAGTGGAGTTGTGGCATCAACTGGAGAATGAGCTGTACGACGGTCCTGAAGTTGAGGAGACTGATGTTGTAAAAGAGATAAGGGAAGAGGAAGCAACCCACGAAGTAGAGGAAGCCCAGAGTTCAGTACCAGAAACGAAAGAAGTCTACAGATTTTTCCCTCCAGGAAAGATAATGCACATTGTTACACTCCATTCTGACTCGGATAATGAAAATGATGATAGCCCAACCTATGCAAGTTCAGACAGTAGCGAGCTAGATGAGACTAAGATTGGGATTTTTCTAACTTCCAGGTCTCTGTATAGTAAACTTAGACTCTCCCAGAGAATGATCAGTGATCACTTCATGCCAGTTTATAGAAGGCAGATTGAAAAACTAATAAAAGAACTTGAGCAGGAAGATACTGAGGGCCATGATACACAAGATGTGGTGTTATTATAG 1968 0.4411 MATATMATAAGAAALLYYTLNRKLQTQDAIDEDAEENGSETTDTPLGSARISHPLIQAPGTWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYQVDSEFCGKDSVQLKGPEITAELKYLLKLLTLCWHFSKKPFPLFLDETGYTEENVLLREAKAGILKPAFTIIVDHDMRCLLLLIRGTHSIKDTLTAVTGSVVPFHHTVVHQGGVRDLVLGYAHCGMVAAARWISKLATPCLLEALGHYPDYKVKIVGHSLGGGTAAILTYVLREIKELSVATCVTFAPAACMTWELAESGDSFITSIINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIATARAKVAGAGAILQPVSNGTQVVMKRAKSMAAWARPNLSLSSWSCMGPRRRALSAYSNSRDGESSPTSSSTNIDCSESLLRSPKKAINAKNMNLPVSSSIEEWSSEIECANESSSDTDVDVDHGDRQNLMDHDRYDDQMSEVELWHQLENELYDGPEVEETDVVKEIREEEATHEVEEAQSSVPETKEVYRFFPPGKIMHIVTLHSDSDNENDDSPTYASSDSSELDETKIGIFLTSRSLYSKLRLSQRMISDHFMPVYRRQIEKLIKELEQEDTEGHDTQDVVLL 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02390 655 MobiDBLite consensus disorder prediction 426 444 - -
Viun10g02390 655 MobiDBLite consensus disorder prediction 423 444 - -
Viun10g02390 655 Coils Coil 625 645 - -
Viun10g02390 655 Pfam Lipase 3 N-terminal region 51 130 IPR005592 GO:0016042
Viun10g02390 655 Pfam Lipase (class 3) 185 322 IPR002921 GO:0006629
Viun10g02390 655 SUPERFAMILY alpha/beta-Hydrolases 148 322 IPR029058 -
Viun10g02390 655 Gene3D alpha/beta hydrolase 148 358 IPR029058 -
Viun10g02390 655 CDD Lipase_3 176 321 - -
Viun10g02390 655 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 6 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02390 Viun-Chr10 38188558 38194734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02390 15 642 Acyl Lipid Metabolism Gene Families AT3G14075 63.084 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02390 - - gsj:114390808 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02390 10 38188558 38194734 Viun10g02390 10 38188558 38194734 ECH