Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02388 ATGAGAACCCCTTTTGTCGGATTCAGCTGCATACTTGTGCTTCTTGCTTTCGCCTCTGCTTCCTGTTCTTCTACCTATGGAAGTATGGAAATGGAGAGAACTTTGGCGATTATAAAACCAGACGGATTAATTGGTAACTACACCGATGATATCAAGAGAACAATTGTAGAATATGGTTTCACCATTTTTAAGGAAAAGATTGTTCAACTTGATCAAGCCACTGTAGAAAAGTTTTATGCCGAGCACTCTTCAAAAGGTTTCTTTTCCAGACTTACAAAATACATGACAAGTGGACCAGTGTTGGCTATGATCTTGGAGAAGGATAACGCTATTGCTGATTGGCGTGCTTTAATGGGTCCTACTGATGCAAGCAAGGCTAAGATTACTCACCCTCACAGTATCAGAGCAAGATGTGGATTGGATATAGAAAGGAATTGTGTTCATGGTTCAGACTCTCCTAAATCTGCACAAAGAGAGATTTCATTCTTCTTTAAGGAGCTGTCCGCAGATGTGGTTGCAGAGCATGATGAATTGTAG 537 0.406 MRTPFVGFSCILVLLAFASASCSSTYGSMEMERTLAIIKPDGLIGNYTDDIKRTIVEYGFTIFKEKIVQLDQATVEKFYAEHSSKGFFSRLTKYMTSGPVLAMILEKDNAIADWRALMGPTDASKAKITHPHSIRARCGLDIERNCVHGSDSPKSAQREISFFFKELSADVVAEHDEL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02388 178 ProSitePatterns Nucleoside diphosphate kinases active site. 145 153 IPR023005 -
Viun10g02388 178 Gene3D - 25 176 IPR036850 -
Viun10g02388 178 PRINTS Nucleoside diphosphate kinase signature 34 56 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Viun10g02388 178 PRINTS Nucleoside diphosphate kinase signature 98 115 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Viun10g02388 178 PRINTS Nucleoside diphosphate kinase signature 78 97 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Viun10g02388 178 PRINTS Nucleoside diphosphate kinase signature 145 164 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Viun10g02388 178 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Viun10g02388 178 SMART ndk_5 31 171 IPR034907 -
Viun10g02388 178 SUPERFAMILY Nucleoside diphosphate kinase, NDK 29 167 IPR036850 -
Viun10g02388 178 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 8 174 - -
Viun10g02388 178 FunFam Nucleoside diphosphate kinase 28 176 - -
Viun10g02388 178 Pfam Nucleoside diphosphate kinase 32 166 IPR034907 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02388 K20790 - gmx:100500470 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02388 10 38141564 38144162 Viun10g02388 10 38141564 38144162 ECH