Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02350 ATGAGCAGGATCGGTGATTCGTTAAACGTGGATTTGGCGGCTGCAGTGAACAACCTCTTCAATATTCCTGAAACCATGGAAAAGTTGATGTTTATCCCTTCTTCTGGTGGGCATGAGCAGCATGAGAGCAGAGGGGTTTCTAGCATGATTCCAGTGGACATTTTGGAGACTCCGAAGGAATTTATATTCTTCATGGATGTTCCTGGTCTCTCCAAGTCTGAAATTCAGGTGACAGTTGAAGATGGGAACACAGTTGTGATACGAAGCAATGGGAAGAGGAAACGGCACGATGGAGATGATGAAGGGTGCAAGTATCTCAGGCTGGAGAGGAGAGGGTCTCAGAATTTGCTGAGGAAGTTCCGTTTGCCTCAGAATGCCGATGTGTCGGCAATAACAGCGAAATGCGAAAATGGGGTTCTCACTGTAGTTGTTGGGAAGCACCCTCCTCCAAAATCCAAATCTGTTCAAGTTGCTATTGCTTGA 483 0.4638 MSRIGDSLNVDLAAAVNNLFNIPETMEKLMFIPSSGGHEQHESRGVSSMIPVDILETPKEFIFFMDVPGLSKSEIQVTVEDGNTVVIRSNGKRKRHDGDDEGCKYLRLERRGSQNLLRKFRLPQNADVSAITAKCENGVLTVVVGKHPPPKSKSVQVAIA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02350 160 Pfam Hsp20/alpha crystallin family 53 157 IPR002068 -
Viun10g02350 160 CDD ACD_sHsps-like 53 146 - -
Viun10g02350 160 SUPERFAMILY HSP20-like chaperones 38 159 IPR008978 -
Viun10g02350 160 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 157 IPR031107 -
Viun10g02350 160 Gene3D - 11 159 IPR008978 -
Viun10g02350 160 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 43 160 IPR002068 -
Viun10g02350 160 FunFam 17.4 kDa class III heat shock protein isoform A 9 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02350 Viun-Chr10 37910512 37911495 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02350 K13993 - gmx:100803161 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02350 10 37910512 37911495 Viun10g02350 10 37910512 37911495 ECH