Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02347 ATGGATTCAAATTCAACAAAGGAGAAGGTGCAGACCAACGACGCTGTTGCAGATGGAGCCGACCTTAAGTCTTGTTATATGCAGAAGTTCAGGCTCTATGAGACTCGCTCGAAATTTTACATGATCGGAAGAGACAAACACAGAACATTTTGGAGGGTCTTAAAGATTGACAGATTGGAGCCATCTGAATTGAACATCGTTGAAGATTCAACAATATACTCAGAAATTGAGTGCTGTGACCTTCTGAGGCGGGTACATGAAGGAAACAAGTCTACAGGAGGGCTTAAATTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTCGAGCCATATTACATGCTGCTTATAACGAAGCGAAGGAAGATCGGCACAATCTGTGGTCACAATATATATGCTATCACAAAAAGCGAAATGGTTCCAATTCCACATTCTACCGTGCGATCCAAAATGGCTTATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTGCGAAGGACTTCTTTTTCAGCTACTCCTACAATGTTATGTTTAGTCTTCAACGCAACTTATCTGATCATAATACTACAGGGCAATCCGTATATGAAACCCTTTTTGTTTGGAATGAGTTCTTGACTCGTGGAATCAGGAATAATCTCCAGAATACTTCATGGACTGTAGCCTTAGTACATGGCTTTTTTAAACAGGTCAAACTTTCCATATCTGACAGTGAGTTCAACTTGACTATCATTGCTAGGCGCTCAAGGCATTATGCTGGGACCAGATATTTGAAACGAGGAGTTAATGAAAAGGGTAGAGTAGCTAATGATGTTGAGACAGAGCAGATAGTCTTTACAGAAGCTCGTGATGGACACCCTATGCAAATCAGTTCTGTGGTGCAGAACAGGGGTTCAATCCCTCTCTTCTGGTCTCAGGAAGCCTCTAGATTGAATATAAAACCAGACATTATATTATCAAGAAAGGACTCTACTTTTGAGGCAACTAGACTTCATTTTGATAACCTTGTCAAAAGATATGGAAAGCCAATTATTATTCTGAACTTAATAAAGACACGTGAGAAGAGGCCTCGAGAAACTATTCTGCGAGCCGAGTTTGCAAATGCTGTTAGGTATATTAATAAAAGTTTGAGAGGGGAAGATCGCTTGAGGTTCCTTCATTGGGATCTGCATCGGCATTCAAGATGCAAAGCTACTAATGTGTTGGGACAGCTGGCAAAAGTGGCTGCATACGCGCTGAAGCTGACTGGCATCTTCTACTCTCCAGTGACACCAAATATAAGGCTAGATGGATTATCCCAATATTCCTACTCTGAGAATAACAATGTCATCATTGATCACAGTATCACAGAAGAAGCCAGCATAAATAAGAATGATGTTGATACCGAAACAGAAGTTAGCAATTGTTATTATAGGGATGATGAGAACAAAGATTACAATGACAAACCCCTGATGCTTCAATCCGGGGTGTTAAGGACTAACTGCATAGACTGTTTAGATCGTACCAATGTTGCTCAATATGCTTATGGACTGGCTGCACTTGGACGTCAGCTTCAAGTTTTAGGATTTACTGAATCCCCAAATATTGATCTTGATAACCCTTTGGCCGAGGAATTAATGGAAGTCTATGAGTCCATGGGCGACACATTAGCCTTTCAATATGGAGGTTCTGCAGCACACAACAAGATATTTTCTGAAAGAAGAGGTCAATGGAAGGCAGCAACACAGTCCCAGGAATTTATTCGAACCCTACAGCGTTATTACAACAACACATATTTAGATGGTGATAAACAAAAAGCAATTAACTTATTCTTGGGGCATTTTCAGCCGCAACAGGGAAAACCAGCACTGTGGGAGCTTGATTCGGATCAGTATTATGCTGTCAAGAGACATGGCCTTTATTTAACAGATGGCAGCGTTAGGTCAACTATTACGAGATCTCTATCAGATGGTAACATTCTTGGTGAAAGTGATGCTTCCATTAGGAACTTGAATGATGATACAGATTGTCAGAAATCATCTGAAAATCCTGATAAGCGTTTCCTTTCGGGGTCTACGCCGGATATCTTTACTTGTGGAAGTGATATTTGTCATTGCAGGCAGATACATGGAGGAATGGTCAAGGGAAAACATTGTGAGAGTGGTCATATTTGTTACGATGAACATGGAGATGCATGTGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAAAGATCAACCAGCATCTCCTCGGAGAATATCGCAAATGAACTAGTAACCACTGAGACATCTGCTAGTGAATCTGGATCCAGCCTTAAGGGAAGGCAGAGTGGAGAAGAACTGAAAGAAGTGAACAAAGAAGATAGGAAGTACAGTGAAAGGTTTGAACGTTGGGTAAATGAAGGAGATATGCATTTTGTTTGA 2460 0.4057 MDSNSTKEKVQTNDAVADGADLKSCYMQKFRLYETRSKFYMIGRDKHRTFWRVLKIDRLEPSELNIVEDSTIYSEIECCDLLRRVHEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHNIYAITKSEMVPIPHSTVRSKMAYSKDENRYKKLLCSVDLAKDFFFSYSYNVMFSLQRNLSDHNTTGQSVYETLFVWNEFLTRGIRNNLQNTSWTVALVHGFFKQVKLSISDSEFNLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTEARDGHPMQISSVVQNRGSIPLFWSQEASRLNIKPDIILSRKDSTFEATRLHFDNLVKRYGKPIIILNLIKTREKRPRETILRAEFANAVRYINKSLRGEDRLRFLHWDLHRHSRCKATNVLGQLAKVAAYALKLTGIFYSPVTPNIRLDGLSQYSYSENNNVIIDHSITEEASINKNDVDTETEVSNCYYRDDENKDYNDKPLMLQSGVLRTNCIDCLDRTNVAQYAYGLAALGRQLQVLGFTESPNIDLDNPLAEELMEVYESMGDTLAFQYGGSAAHNKIFSERRGQWKAATQSQEFIRTLQRYYNNTYLDGDKQKAINLFLGHFQPQQGKPALWELDSDQYYAVKRHGLYLTDGSVRSTITRSLSDGNILGESDASIRNLNDDTDCQKSSENPDKRFLSGSTPDIFTCGSDICHCRQIHGGMVKGKHCESGHICYDEHGDACDCSNFLDVDWLSSSGNSCEEELLERSTSISSENIANELVTTETSASESGSSLKGRQSGEELKEVNKEDRKYSERFERWVNEGDMHFV 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02347 819 ProSiteProfiles Sac phosphatase domain profile. 166 562 IPR002013 GO:0016791
Viun10g02347 819 MobiDBLite consensus disorder prediction 772 787 - -
Viun10g02347 819 MobiDBLite consensus disorder prediction 772 803 - -
Viun10g02347 819 MobiDBLite consensus disorder prediction 788 803 - -
Viun10g02347 819 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 13 782 IPR043573 GO:0043813|GO:0046856
Viun10g02347 819 Pfam SacI homology domain 102 400 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02347 Viun-Chr10 37885371 37895647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02347 27 815 Acyl Lipid Metabolism Gene Families AT5G20840 55.037 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02347 K22913 - gmx:100806380 1436.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02347 10 37885371 37895647 Viun10g02347 10 37885371 37895647 ECH