Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02318 ATGGACCTCCCCACCCATAAATTCTTCCAATCTCCTTCTGCATTGGCAGTGGCAGTGGCACCACATGGGGAAGCACTCGCTGAGAGCAACGTGAACATGTATGGGAAAAGCAAAGACAACCCTTTTGCGGATGATTTCCCTGATCCTCTTTGCAAGCTCAACCTGAAGGAAACCTCTGAGTTTGTCAAGTCTCTGCCTGTGCCCAGTGGCAGAGCCGAAAGCAGAGGCCACTCTGTTTCACAACAGAGGAGACTGTTGGAAGCTCCTTCTACTCCTGGAAGACCAGTTTTCTCCTTCAGTTCTGGCCTTCCGAGAAAGAGCTTCCCTTCCAAGTGGGATGATGCAGAGAAATGGCTCATGAGCACTTCTTGCCATGACTCACCTGCTCACAACAACATCAGCAACAACAACACACTCAAGGTTTCAGTCTCAGACTCTTCAAAGGTTGCAACCAGACAACAATGTGAAGATGTTGGCTTTAAGCAGCAAATGGAAAATTTCTCGGAGAAATCAAGAGTCACTGAAGAAAGGGTGTCCAAAGCTGTCCCCAACTTCCACTGGTCTCCTTCGTTGGACCACCAGCATAACACACTCGGTGCTTTCCATGGTGTTAAAGACATTGTACTCAAAGATAAGTTCACAGACAGCATAGAGCCTATTTTGCCAAATTTGAGATATTTAGAGCCAGCAAAGGAAGGGTTCTTGTTTAGGAACCAAGATGGTGGTGGGGCAATGCAAGATGCTTGCACAGAAGTGGTTCAGCATAGAGACATTGGCACTGAGATGACTCCTCTGGGAAGTTCCACAACTTCAAGATGCCACACCCCAGTTAAGATTTCATCACCTCCTCGTCACAACACTCCTGCAAGTAGGTCAGGACCATTGGCCTTGGCTACCACTGCATGCACTCTTGATGTCATTCAGCTGGAAGAGTGCCATTTTTCTAAACTGCAACTAGGATCACAGTATGACATAGTCACTTCAAATTGGAGCTCAAGTGAAGAGGAAGAAAAGGAAATATCAAAAAGCTTGAGGCACAATGGGAGCCACAAAGCTGATTCTGACTGCATAGCTGCTTCATGGGAAGAAGAGGAGAAAACCAAGTGTTGTTTAAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTAAATCTCCAAAGTGCTAAAGCAGAGGCCAGGTCAAGAAAGCTTGAGGTGAAAATACAGAAAATGAGATCAAACCTTGAAGAGAAATTGATGAAGAGGATGTCAGTGGTTCACAGAAAAGCTGAGGAGTGGAGAGCAGAAGCGAGACAGCAACACTTGGAGCAAATTCAGAAAGCCACAGAGCAAGCTCAGAAGATGATTCATAAACATAACTCACATTTTTCAAAGCCAAGTTCATGTGGTTGCTTCCCTTGCAATAACAATCATTGA 1419 0.4553 MDLPTHKFFQSPSALAVAVAPHGEALAESNVNMYGKSKDNPFADDFPDPLCKLNLKETSEFVKSLPVPSGRAESRGHSVSQQRRLLEAPSTPGRPVFSFSSGLPRKSFPSKWDDAEKWLMSTSCHDSPAHNNISNNNTLKVSVSDSSKVATRQQCEDVGFKQQMENFSEKSRVTEERVSKAVPNFHWSPSLDHQHNTLGAFHGVKDIVLKDKFTDSIEPILPNLRYLEPAKEGFLFRNQDGGGAMQDACTEVVQHRDIGTEMTPLGSSTTSRCHTPVKISSPPRHNTPASRSGPLALATTACTLDVIQLEECHFSKLQLGSQYDIVTSNWSSSEEEEKEISKSLRHNGSHKADSDCIAASWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEARSRKLEVKIQKMRSNLEEKLMKRMSVVHRKAEEWRAEARQQHLEQIQKATEQAQKMIHKHNSHFSKPSSCGCFPCNNNH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02318 472 PANTHER OS02G0116800 PROTEIN 76 466 - -
Viun10g02318 472 Coils Coil 388 415 - -
Viun10g02318 472 Pfam Remorin, C-terminal region 358 454 IPR005516 -
Viun10g02318 472 Coils Coil 432 452 - -
Viun10g02318 472 MobiDBLite consensus disorder prediction 261 292 - -
Viun10g02318 472 MobiDBLite consensus disorder prediction 66 98 - -
Viun10g02318 472 CDD UDM1_RNF168_RNF169-like 392 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02318 Viun-Chr10 37688989 37693137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02318 - - gmx:100776089 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02318 10 37688989 37693137 Viun10g02318 10 37688989 37693137 ECH