Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02317 ATGCGGAGAACCGCTGCAGACAGATTCAGACACCTTTTCAACCGTTCATTTCTTCTTCATCGTCATCGTCATCATCATCACAATCATAATCACCCTCCCTTTCCTGCTTCTTCCTCTCTCTCTTCTCGCTCTCCGTTTTCCCCCTATCGTTTCTTCTTTTCTACTCCCTTTTCTTCCATGGCTTCTGATTCGCCTTTCCCTGTCACTGCTCAAAACATCAACCCCAAGGTTCTGAAATGTGAGTACGCCGTTAGAGGAGAGGTTGTCACACTTGCTCAGAATTTGCAAAAGGACTTACTGGCCAATCCCGGTTCTCATCCATTTGACGAGATACTCTACTGCAACATTGGAAATCCTCAGTCCCTTGGCCAGCCTCCAATAACTTTTTTCCGAGAGGTTCTTGCATTAACTGATCATCCAGCTATATTGGACAAAAGTGAAACACAGGGTTTGTTCAGTGCTGATGCAATAGAACGAGCTTGGAAGATTGTGGAACAGATTCCTGGTAGAGCAACGGGTGCATATAGCCACAGTCAGGGTGTCAAGGGTCTGCGTGATACAATAGCTGCTGGAATTGAAGAGCGTGATGGTTTTCCTGCCAATCCTGATGACATTTTCATGACAGATGGCGCAAGCCCTGCAGTCCATAATATGATGCAACTACTCATTAGGTCGGAAAATGATGCTATTTTGTGTCCCATTCCACAGTATCCTCTATACTCAGCCTCAATTGCCCTCCATGGTGGCTTCTTGGTACCTTATTATCTAAATGAAGCAAGCGGTTGGGGATTGGAAATACCTGAACTCAAGAAGCAATTGGACGCTGCCAAGTCTAAGGGCATCAATGTTAGGGCTTTAGTTGTTATAAATCCTGGAAATCCAACGGGGCAGGTTCTTTCTGAGGAAAATCAGCGCCATATAGTAGATTTTGCCAAGCAAGAAGGTTTGGTTCTTTTAGCTGATGAGGTATATCAAGAAAATGTTTATGTCCCTGAGAAGAAATTTCACTCATTCAAGAAGGTGGCTCGGTCCATGGGATATGGTGAGAAAGACATCACTTTAGTATCCTTTCAATCAGTCTCCAAAGGCTACCATGGGGAGTGTGGGAAACGAGGAGGTTATATGGAGGTGACTGGCTTTTCTGCAGAAGTGAGGGAACAAATATATAAAGTGGCATCTGTCAACCTTTGCTCTAATATCTCTGGTCAAATTCTTGCAAGCTTGGTCATGAGTCCACCTAAGGTTGGAGACGAGTCCTATGAATCATTCATGGCTGAGAGGGGAAATATTCTGGCATCGCTTGCTAGGCGTGCAAAGACACTAGAAGATGCATTCAACAAGCTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCTATGTATCTGTTTCCCCAAATTCGTCTATCCCAAAAGGCTATCAAAGCTGCAGGGGAGGCAAAAACTGCACCTGATAACTTCTATTGCAAGCGCTTGCTTAATGCTACAGGAGTAGTAGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGCACATGGCATTTCAGATGCACCATTTTGCCACAAGAAGAAAAGATTCCAGCCATTGTTTCCCGTTTGACAGAGTTCCATAAGAAATTCATGGATGAGTTCCGTGACTAA 1638 0.4463 MRRTAADRFRHLFNRSFLLHRHRHHHHNHNHPPFPASSSLSSRSPFSPYRFFFSTPFSSMASDSPFPVTAQNINPKVLKCEYAVRGEVVTLAQNLQKDLLANPGSHPFDEILYCNIGNPQSLGQPPITFFREVLALTDHPAILDKSETQGLFSADAIERAWKIVEQIPGRATGAYSHSQGVKGLRDTIAAGIEERDGFPANPDDIFMTDGASPAVHNMMQLLIRSENDAILCPIPQYPLYSASIALHGGFLVPYYLNEASGWGLEIPELKKQLDAAKSKGINVRALVVINPGNPTGQVLSEENQRHIVDFAKQEGLVLLADEVYQENVYVPEKKFHSFKKVARSMGYGEKDITLVSFQSVSKGYHGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESFMAERGNILASLARRAKTLEDAFNKLEGVTCNKAEGAMYLFPQIRLSQKAIKAAGEAKTAPDNFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPQEEKIPAIVSRLTEFHKKFMDEFRD 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02317 545 Gene3D - 173 419 IPR015421 GO:0003824
Viun10g02317 545 CDD AAT_like 158 534 - -
Viun10g02317 545 FunFam Alanine aminotransferase 2 417 543 - -
Viun10g02317 545 FunFam alanine aminotransferase 2 173 419 - -
Viun10g02317 545 FunFam Alanine aminotransferase 2 122 172 - -
Viun10g02317 545 Coils Coil 431 451 - -
Viun10g02317 545 Pfam Aminotransferase class I and II 169 524 IPR004839 GO:0009058|GO:0030170
Viun10g02317 545 Gene3D Aspartate Aminotransferase, domain 1 71 543 IPR015422 GO:0003824
Viun10g02317 545 PANTHER ALANINE AMINOTRANSFERASE 60 544 IPR045088 GO:0008483
Viun10g02317 545 Gene3D - 122 172 - -
Viun10g02317 545 SUPERFAMILY PLP-dependent transferases 71 539 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02317 Viun-Chr10 37682252 37687378 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02317 K00814 - gmx:100127413 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02317 10 37682252 37687378 Viun10g02317 10 37682252 37687378 ECH