Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02298 ATGATTTCTGGTAAAAGAAATGGGTTTGGCACCAAGGGGAGAACGGGTTTAGATTTCATGGTTTTGGTGTCAACAGTGTTGTGCCTTTGTTTGACTGGTATAAGTGTCTCAGCTACAACACAAGCAGAAGCCCCATCACCTCAACCGAGCCAAAAGCTAAGGTTTAGCCAAAATGGAGAATTCAAGATATTGCAGGTGGCAGATATGCACTATGCAAATGGCAAAACCACACCTTGCTTGGATGTGCTCCCTTCTCAGAATTTTTCTTGCTCTGACCTCAATACTACAGTCTTTATTAACAGAATGATCAAAGCTGAGAAGCCTAATCTTATTGTTTTCACCGGAGACAATATCTTTGGGTTTGATTGCACGGATTCAGCTAAATCAATGGAGGCTGCATTTGCTCCTGCAATTGCATCAAACATTCCTTGGGTAGCTATTTTGGGCAACCATGACCAAGAAGGAACCCTCTCTAGGGAAGGGGTGATGAAGCATATTGTTGGGATGAAAAACACCTTATCTAAATTCAATCCTCCAGAAGCACATATCATTGATGGTTTTGGGAACTATAACTTGGAGGTTGGAGGAGTTGAAGGCTCTGATTTTGAAAATAAATCAGTGCTCAACCTATACTTTCTTGATAGTGGAGATTATTCCAAAGTTTCTACAATTTTTGGTTATGATTGGATCAAGCCCTCCCAGCAACTTTGGTTCCAACGAACATCTGCAAAGCTTAAGAAAGCATATATAAGTGGACCTATGCCTCAGAAAGATGCTGCTCCTGGTCTTACATATTTCCACATCCCTCTGCCAGAATATGCTAGTTTTGACTCATCAAACATGACTGGTGTGAAACTGGAAAATGGCATTAGCTCAGCATCTGTGAACTCTGGCTTCTTCACAACTTTGGTTTCAGCAGGAGATGTGAAAGCAGTTTTCACTGGCCATGATCACCTCAATGACTTCTGTGGAAATCTTATGAATATACAACTTTGTTATGCTGGGGGATTTGGATACCATGCTTATGGAAAGGCAGGGTGGTCTAGGAGAGCAAGAGTGGTGGTAGCTAGCTTGGAGAAAACAGAGAAAGGAAGTTGGGGAGATGTTAAGTCTATTAAAACATGGAAACGCCTTGATGATCAGCATCTTACTGGAATTGATGGTGAGGTACTTTGGAGCAAGAACTCTCAGTGA 1194 0.4179 MISGKRNGFGTKGRTGLDFMVLVSTVLCLCLTGISVSATTQAEAPSPQPSQKLRFSQNGEFKILQVADMHYANGKTTPCLDVLPSQNFSCSDLNTTVFINRMIKAEKPNLIVFTGDNIFGFDCTDSAKSMEAAFAPAIASNIPWVAILGNHDQEGTLSREGVMKHIVGMKNTLSKFNPPEAHIIDGFGNYNLEVGGVEGSDFENKSVLNLYFLDSGDYSKVSTIFGYDWIKPSQQLWFQRTSAKLKKAYISGPMPQKDAAPGLTYFHIPLPEYASFDSSNMTGVKLENGISSASVNSGFFTTLVSAGDVKAVFTGHDHLNDFCGNLMNIQLCYAGGFGYHAYGKAGWSRRARVVVASLEKTEKGSWGDVKSIKTWKRLDDQHLTGIDGEVLWSKNSQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02298 397 Pfam Calcineurin-like phosphoesterase 61 319 IPR004843 GO:0016787
Viun10g02298 397 Gene3D - 89 394 IPR029052 -
Viun10g02298 397 PIRSF Ptase_At2g46880 14 392 IPR011230 -
Viun10g02298 397 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 24 395 - -
Viun10g02298 397 FunFam Probable inactive purple acid phosphatase 29 60 370 - -
Viun10g02298 397 CDD MPP_Dcr2 59 343 - -
Viun10g02298 397 SUPERFAMILY Metallo-dependent phosphatases 58 358 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02298 Viun-Chr10 37521512 37524672 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02298 - - gmx:100794167 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02298 10 37521512 37524672 Viun10g02298 10 37521512 37524672 ECH