Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02271 ATGGGTACTGAGGAGAATGGTGAAAAAGTTCGTGAAACTCGTCCAACTCCTAAATTAAATGAAAGGATTCTGTCATCTTTGTCTAGGAGATCAGTTGCTGCTCACCCTTGGCATGATCTTGAAATTGGACCTGGGGCACCTATGATTTTTAATTGTGTTGTGGAGATCACTAAAGGAAGCAAGGTCAAATACGAACTTGACAAAAAAACTGGATTAATTAAGGTTGATCGAATATTGTACTCATCAGTAGTTTATCCTCATAACTACGGTTTCATCCCAAGAACTCTATGTGAGGACAATGATCCACTTGATGTCTTGGTTCTCATGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTAAGAGCCAGAGCCATTGGACTCATGCCTATGATTGATCAGGGGGAGAAGGATGATAAAATTATTGCTGTATGTGCTGATGATCCTGAGTACAAACACTATACTGACTTGAAAGAACTTGCACCTCATCGCCTCTCTGAGATTAGACGTTTCTTTGAAGATTACAAGAAGAATGAGAACAAGGAGGTAGCAGTTAATGATTTTTTACCTGCATCTACTGCTATTGAAGCCATCCAATTCTCAATGGATCTTTACGCGGAGTATATTCTGCTTACTTTGAGGCGATAA 642 0.4019 MGTEENGEKVRETRPTPKLNERILSSLSRRSVAAHPWHDLEIGPGAPMIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDLKELAPHRLSEIRRFFEDYKKNENKEVAVNDFLPASTAIEAIQFSMDLYAEYILLTLRR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02271 213 CDD pyrophosphatase 48 201 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Viun10g02271 213 ProSitePatterns Inorganic pyrophosphatase signature. 99 105 - -
Viun10g02271 213 FunFam Soluble inorganic pyrophosphatase 4 31 209 - -
Viun10g02271 213 SUPERFAMILY Inorganic pyrophosphatase 29 207 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Viun10g02271 213 Pfam Inorganic pyrophosphatase 52 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Viun10g02271 213 Hamap Inorganic pyrophosphatase [ppa]. 48 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Viun10g02271 213 Gene3D Inorganic pyrophosphatase 31 209 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Viun10g02271 213 PANTHER INORGANIC PYROPHOSPHATASE 12 213 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02271 Viun-Chr10 37364850 37367497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02271 K01507 - gmx:100781974 404.06