Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02213 ATGCAGCAGACACCGCCAATGATTCCTATGATGCCTTCTTTCCCACCAACTAACATAACCACCGAGCAGATTCAAAAGTACCTTGATGAGAACAAGAAGCTGATTCTGGCCATATTGGACAATCAAAATCTTGGAAAACTTGCAGAATGTGCCCAGTACCAAGCCCAGCTTCAAAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCTCAAACCCCAGCAATGCCTCCACAGATGGCTCCACACCCTGCCATGCAACCAGGATTCTATATGCAACATCCTCAGGCGGCGGCAGCAGCAGCAGCAATGGCTCAGCAGCAAGGCATGTTCCCTCAGAAAATGCCATTACAATTTGGTAACCCACATCAAATTCAGGATCAGCAGCAGCAGCTACACCAGCAGGCTATCCAAGGTCAAATGGGACTGAGACCGGGAGGGATAAACAATGGCATGCATCCAATGCACAGTGAGGCTGTTCTGGGGAGCGGCAACAGCGGTGGTCCACCGTCGGCTGCCGGTCCAAACGATGCACGTGGTGGAAACAAGCAAGATGCTTCTGAGGCCGGGACAGCCGGTGGAGACGGGCAAGGTGGCTCTGCTGCTGCACACAACAGCGGAGATGGTGAATCTTCTTATCTGAAGGGGTCAGAAGGGGCCAAGTGA 669 0.5187 MQQTPPMIPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAMPPQMAPHPAMQPGFYMQHPQAAAAAAAMAQQQGMFPQKMPLQFGNPHQIQDQQQQLHQQAIQGQMGLRPGGINNGMHPMHSEAVLGSGNSGGPPSAAGPNDARGGNKQDASEAGTAGGDGQGGSAAAHNSGDGESSYLKGSEGAK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02213 222 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
Viun10g02213 222 MobiDBLite consensus disorder prediction 142 222 - -
Viun10g02213 222 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 2 219 IPR044779 GO:0003713
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02213 Viun-Chr10 36969776 36974157 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02213 - - vun:114167142 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02213 10 36969776 36974157 Viun10g02213 10 36969776 36974157 ECH