Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02174 ATGTCCAACTTAATCACCTTGTTTATGCTGTGGTTGTGTCTGCTATCTGCTATTTACAATGTGAAGCTTATAGCACATGGAAGTATTATGGGAGGATCAACCAGGTTCTATGATTTCAAGGTTCAAACCAAAAGAGATACCAAACTTTGCAACTCCAAAGACATTGTCACAATTAATGGTATGTTTCCAGGACCTGTTATTTACGCTCAAGAGGATGATAGAATCATAGTAAAAGTGACCAACGAGACACCTTTCAATGTTACAATTCACTGGCATGGTGTTCGGCAAAGGCTATCATGCTGGTATGATGGGCCATCCTTGATTACACAATGTCCAATTCAATCAGGCCAGAGCTTCACTTATAATTTTTCAGTGGTGCAGCAGAAGGGAACCTTCTTCTGGCATGCTCATGTTTCTTGGTTAAGAGGAACAGTTCATGGTGCCATGATTGTTTATCCAAAGGCTGGGGTAACTTACCCGTTTAAGTTTCCCTATCAAGAGCACATAATTATACTGGGGGAATATTGGCTGAAGGATCTCCAAGAAATTGAGAAGGCCACTCTAGCAAGTGGAGGACCTCCTCCAAAAGCAGATGCATATACCATTAACGGTCATCCAGGAACCAACTACAACTGCTCCACTAATGATGTCTACAAAATTGATGTGATTCCGGGAAAGACCTATTTGTTAAGATTGATTAATGCGGGTCTGAACACTGAGAATTTCTTCGCCATTGCTAATCACAATTTAACAATCGTGGAAGCTGATGCTGAATACACCAAGCCATTCACCACAGACTCAGTGATGATTGGACCAGGTCAAACATTGAGTGTCCTAGTCACTGCAAATCAGCCAGTAAGAAAATACTCCATGGCTGTAGCACCTTATGAGTCTGGAAAGATTGTCATATATCAAAACGTTTCAGCTATAGCAGGCTTCAACTACATAGGAGCTCCATCTGATAGCCTATCTTTACCTGCTAAATTGCCTAAACTTGATGATGAAGTGGCTGTTAAGACAGTTATGGACGGATTAAGGAGCCTAAATCAAGTCAATGTTTTTAAGGAAATCGATAAACATCTATTCATTACCATTGGATTGAATGTTCAAAAGTGTCAATCAAAGACACCCAAGAAAAACTGCCAAGGCATGCACAATGGGGTGCTGGCAGCTTCAATGAACAATATAAGTTTCGTTAATCCCAATATTTCAATCTTGGAAGCATATTATAAGAAAATAAAAGGAACATACACTGAAGATTTCCCAGACACACCCCCAAAGTTCTATGACTTTGTTAATGGTGCCCCTAATAGCATTCCATATGACACGCAGTCATCGAATGGTACAAGAATAAAGGTCCTTGAATATGGTAGCAGGGTGCAACTCATTCTGCAGGACACAGGGACAGTTAACACTGAAAACCACCCAATGCACTTCCATGGCCACAGCTTTTATGTGGTAGGGTATGGCAAGGGCAACTATAACCCAGTAACTGCACAATTCAATTTAGTGGATCCTCCATACATGAACACAATTGGAGTTCCAACAGGAGGATGGGCAGCAATTCGCTTTGTTGCTGATAATCCAGGGGTCTGGTTTCTGCACTGCCACATTGATATACACAAGTCATGGGGACTGGGAATGGTATTTATAGTGAACAATGGACAAGGAGAGCTGGAATCCTTACCACATCCTCCGCCAGACTTGCCACAGTGTTAA 1719 0.4148 MSNLITLFMLWLCLLSAIYNVKLIAHGSIMGGSTRFYDFKVQTKRDTKLCNSKDIVTINGMFPGPVIYAQEDDRIIVKVTNETPFNVTIHWHGVRQRLSCWYDGPSLITQCPIQSGQSFTYNFSVVQQKGTFFWHAHVSWLRGTVHGAMIVYPKAGVTYPFKFPYQEHIIILGEYWLKDLQEIEKATLASGGPPPKADAYTINGHPGTNYNCSTNDVYKIDVIPGKTYLLRLINAGLNTENFFAIANHNLTIVEADAEYTKPFTTDSVMIGPGQTLSVLVTANQPVRKYSMAVAPYESGKIVIYQNVSAIAGFNYIGAPSDSLSLPAKLPKLDDEVAVKTVMDGLRSLNQVNVFKEIDKHLFITIGLNVQKCQSKTPKKNCQGMHNGVLAASMNNISFVNPNISILEAYYKKIKGTYTEDFPDTPPKFYDFVNGAPNSIPYDTQSSNGTRIKVLEYGSRVQLILQDTGTVNTENHPMHFHGHSFYVVGYGKGNYNPVTAQFNLVDPPYMNTIGVPTGGWAAIRFVADNPGVWFLHCHIDIHKSWGLGMVFIVNNGQGELESLPHPPPDLPQC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02174 572 PANTHER MULTI-COPPER OXIDASE 39 557 IPR045087 -
Viun10g02174 572 Pfam Multicopper oxidase 167 317 IPR001117 -
Viun10g02174 572 SUPERFAMILY Cupredoxins 355 572 IPR008972 -
Viun10g02174 572 Pfam Multicopper oxidase 41 155 IPR011707 GO:0005507
Viun10g02174 572 NCBIfam laccase 33 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Viun10g02174 572 Gene3D - 19 153 IPR008972 -
Viun10g02174 572 SUPERFAMILY Cupredoxins 164 310 IPR008972 -
Viun10g02174 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Viun10g02174 572 SUPERFAMILY Cupredoxins 30 176 IPR008972 -
Viun10g02174 572 CDD CuRO_2_LCC_plant 168 315 IPR034285 -
Viun10g02174 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Viun10g02174 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Viun10g02174 572 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Viun10g02174 572 Pfam Multicopper oxidase 423 555 IPR011706 GO:0005507|GO:0016491
Viun10g02174 572 Gene3D - 163 350 IPR008972 -
Viun10g02174 572 Gene3D - 370 572 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02174 Viun-Chr10 36576091 36578773 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02174 K05909 - gmx:100803876 1056.2