Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02165 ATGGAAGAGAAAGTAAAGTTTCAGTTTTTCTCTTCCTTGTTAACCTTCTTCATCTGTGTCTATGGCGCGTACACTGAACCACTTAACTCCGAAACCCTCATTCTCCGTAACCATAACCTCCCCAACCCACCCACACTCTCTTGGCCCGAATCCACCACCTCTGGGTCCGATCCCGAACCCGACCCGTCCACCATCTCCGTTCATCTCCACCACATAGACGCACTCTCTCTCAACAAAACCCCCTCCCAACTCTTCCACCTAAGGCTCCAACGCGACGGCGCAAGAGTCAAAGCTCTCTTCTCCTTGGCCTCATTGAACCAAACCCGGACTACAACTTCTGGGTCGGGTTTCAGCAGCTCCGTGATCTCGGGTCTTGCACAGGGTAGCGGCGAGTACTTCACGCGCCTAGGCGTGGGAACTCCTCCGATGTATGTCTATATGGTGCTTGACACTGGAAGCGACGTCGTTTGGCTCCAATGCAAACCCTGCGCCAAATGCTACTCCCAAACCGACGAAATCTTCGATCCTTCAAAGTCCTCATCTTTCGCCGGAGTACCCTGCTCCTCCCCCCTCTGCCGCCGCCTCGACTCGCCGGGATGCAGCCGGAAAAGCAGCAATTGCCAGTATCAGGTTTCCTACGGCGACGGCTCGTTCACGTTCGGCGATTTCTCCATAGAAACTCTCACGTTCCGACGAGCGCAAGTCCAGCGTGTGGCTCTCGGCTGCGGCCACGACAACGAGGGCCTCTTTGTGGGCGCCGCAGGTTTGTTGGGCCTAGGTCGCGGCGGCTTGTCGTTTCCAACCCAAGCCGGAGCCCGGTTCAACAACAAATTTTCATACTGTTTAACTGATCGAACCGCTTCCTCCAAACCGTCTTCGATTGTGTTTGGCGACTCGGCCGTTTCGCGAACCGCGCGGTTCACTCCTATTATTAATAACCCTAAACTCGACACCTTTTATTATCTCGAGTTACTTGGAATCAGCGTTGGCGGCGCGCCGGTTCGAGGCATTTCGGCTTCGCTCTTTCGTATCGACTCGACCGGGAATGGTGGAGTGATTATTGACTCGGGGACTTCCGTGACGCGCCTCACGCGACCTGCTTACGTGGCTCTCAGAGACGCGTTTCGGGTCGGAGCTTCGCATTTGAAACGCGCGCCCGAGTTCTCGCTTTTCGACACATGTTATGATCTTTCGGGGTTGCCGGAGGTTAAGGTTCCGACCGTGGTGTTGCATTTTCGCGGTGCTGATGTGTCGTTACCGGCGGCGAATTATCTCATTCCGGTGGATAACAGCGGCAGATTCTGCTTTGCGTTCGCCGGAACAATGAGTGGGCTTTCTATCATTGGAAACATTCAACAGCAAGGATTTCGGGTTGTGTTTGATTTGGCGGGTTCTCGGGTCGGATTTGCCCCAAGAGGGTGCGCGTGA 1428 0.5483 MEEKVKFQFFSSLLTFFICVYGAYTEPLNSETLILRNHNLPNPPTLSWPESTTSGSDPEPDPSTISVHLHHIDALSLNKTPSQLFHLRLQRDGARVKALFSLASLNQTRTTTSGSGFSSSVISGLAQGSGEYFTRLGVGTPPMYVYMVLDTGSDVVWLQCKPCAKCYSQTDEIFDPSKSSSFAGVPCSSPLCRRLDSPGCSRKSSNCQYQVSYGDGSFTFGDFSIETLTFRRAQVQRVALGCGHDNEGLFVGAAGLLGLGRGGLSFPTQAGARFNNKFSYCLTDRTASSKPSSIVFGDSAVSRTARFTPIINNPKLDTFYYLELLGISVGGAPVRGISASLFRIDSTGNGGVIIDSGTSVTRLTRPAYVALRDAFRVGASHLKRAPEFSLFDTCYDLSGLPEVKVPTVVLHFRGADVSLPAANYLIPVDNSGRFCFAFAGTMSGLSIIGNIQQQGFRVVFDLAGSRVGFAPRGCA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02165 475 Gene3D Acid Proteases 296 475 IPR021109 -
Viun10g02165 475 Pfam Xylanase inhibitor C-terminal 320 470 IPR032799 -
Viun10g02165 475 ProSiteProfiles Peptidase family A1 domain profile. 132 470 IPR033121 -
Viun10g02165 475 Pfam Xylanase inhibitor N-terminal 132 298 IPR032861 -
Viun10g02165 475 CDD cnd41_like 131 474 IPR033873 -
Viun10g02165 475 SUPERFAMILY Acid proteases 125 474 IPR021109 -
Viun10g02165 475 Gene3D Acid Proteases 106 295 IPR021109 -
Viun10g02165 475 PRINTS Pepsin (A1) aspartic protease family signature 446 461 IPR001461 GO:0004190|GO:0006508
Viun10g02165 475 PRINTS Pepsin (A1) aspartic protease family signature 138 158 IPR001461 GO:0004190|GO:0006508
Viun10g02165 475 PRINTS Pepsin (A1) aspartic protease family signature 352 363 IPR001461 GO:0004190|GO:0006508
Viun10g02165 475 PANTHER ASPARTYL PROTEASES 56 468 IPR001461 GO:0004190|GO:0006508
Viun10g02165 475 FunFam Aspartyl protease family protein 2 298 474 - -
Viun10g02165 475 FunFam aspartyl protease family protein 2 109 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02165 Viun-Chr10 36475170 36476834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02165 122 474 Miscellaneous Gene Families AT1G77480 27.979 1.08e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02165 K22683 - gmx:100808163 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02165 10 36475170 36476834 Viun10g02165 10 36475170 36476834 ECH
Viun6g01801 6 25204433 25206212 Viun10g02165 10 36475170 36476834 PCT