Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02158 ATGGCACCAAGAAACAGTCGCGGAAAGGCCAAGGGTGAGAAGAAAAAGAAGGAAGAAAAGGTTCTTCCAGTTGTCATAGACATCACAGTGAAGCTTCTAGATGAAACTCATGTTCTCAAGGGAATATCAACGGACAGAATAATAGATGTTCGTCGGCTTTTATCAGTGAATACGGACACATGTTATGTCACAAATTTTTCCCTGTCCCATGAGGTAAGAGGGCCACGTCTGAAGGACACGGTGGACGTGTCCGCACTGAAGCCCTGCCTCCTGACTTTAGTTGAAGAGGAATACAATGAAGAACGAGCAGTGGAGCACGTGCGTAGACTCCTCGATATCGTCGCCTGCACCACGAGCTTCGGTCCGTCGCCGCCTCCGAAGAACGCGGCCGGCACAGTCACGAAGTCCGGCAAGTCTGAGATCCCGCCGGCGAAAGATGCGGCGGTGACGGTTGCGGACGTGGATGGCGAGATAAGCCACTCGTGCCCTAAGCTGGAGAACTTCTACGAGTTTTTCTCTCTTTCGCACCTCACCGCACCTATACAATATGTGAAGAAAGGTTCGAGGCGGCGCGTGGAGGAGATATCGGAGGCGGATTATCTGTTCTCGCTGGATGTGAAGGTGTGCAACGGGAAAGTGGTGCACGTCGAGGCTTGCAGAAAGGGGTTCTACAGCGTTGGGAAGCAGCGGATTCTGTGCCATAATCTGGTTGATTTGTTGAGACAGCTTAGCAGAGCTTTTGATAATGCTTTCGATGATCTCTTGAAGGCATTTTCAGAGCGTAACAAGTTTGGGAATCTCCCATATGGCTTCAGAGCCAACACGTGGCTTGTTCCTCCTGTTGCTGCACAGTCACCCTCATCTTTTCCTCCTCTTCCTGTGGAGGATGAAACATGGGGAGGGAATGGTGGTAGTCTCGCAAAAGATGGAAAGTATGATTTGATTCCTTGGGCCAAAGAGTTTTCAGTAATTGCGTCTATGCCTTGCAAGACAGCAGAAGAAAGACAAGTTCGTGATAGAAAAGCATTTCTTCTGCACAGCCTGTTTGTTGATGTTTCTATTTTCAGAGCAATAAGGGCTGTTAAACATGTTATGGAAGAGCCCAATTTTAGTTGCTCTGTTGTAGAAAATAATATTGTTTACACTGAGAGAGTAGGTGACTTGAGCATCAAGGTCTTGGAAAATGGTTCTGTTGCAAGCTCTAAGATCGATACTAAAATTGATGGAGTTGAAGCTACTGGAGTAAATCAAAAGGATCTAATAGAACGAAATCTACTGAAAGGCATCACTGCTGATGAAAATACTGCTGCCCATGATATTACCACTTTAGGTGTCGTTAATGTAAGATACTGTGGTTATGTGGTCGTTGTGAAAGTTGAGGGTGGAGTGAGGGAAAATGTTGACTCTCCATCTCAACAAACAATTGAATTGTTTGATCAGCCAGAGGGTGGGGCCAATGCACTCAATATTAACAGTCTGAGATTACTTCTTCACAACACAACTCTACCAGAAAACAATAAACCAATGATTCAGATAAAAACGTTTGAGAGTGAAGAGACTGGTGCTTCCCATTCTTTTGTAGAGAAGCTGATTAAAGAAAGTCTTGCTAAGCTTGAGGAGGAAGAACCTGGTATGGACTATTTTGTAAGATGGGAACTTGGAGCTTGCTGGATGCAACATTTGCAAGACCAAAATAATAATACAGAAAAAGATAAGAAACCATCCTTGGAGAAGGCTAAGAATGAGATGAAGGTCGAGGGTCTTGGGAAACCCCTTAAAGCCCTAAAGAATTTTAAAAAGAAATCTGATTCAAGCAATATTACTTCTGCATCTGAATACCCAAAATTTAGTCGGGAGTCTGAAAGCCCTCCATTGCCCTCAATTGAGTCGCAACATGAAACTACAGAAGCTGAGAACGAGCTTGTTCTGAAAAGGATGTTATCTGAGGAAGCTTTTACCCGATTTAAAGAAACGGGAACTGGACTTCACTGCAAGTCTATGCATGATTTGATTGACTTATCTCAAAAATATTACAAAGACGTTGCACTCCCAAAATTGGTAGCAGATTTTGGCTCATTAGAACTCTCACCAGTTGATGGACGAACTCTAACTGATTTTATGCATACTAGGGGTCTACGAATGCGTTCTCTTGGACATGTTGTCAAACTTTCAGAAAAGCTTTCACATGTGCAATCGCTTTGTATTCACGAAATGATAGTTCGAGCTTTTAAGCACATCCTGCGGGCAGTAATTTCTTCTGTTAACAAGGAGAAAATGGCTTCATCAATAGCTGGTGCTTTGAATTTTCTGCTCGGTGTTCCTGGAAAGAGAGATTCAGATAAATCACATGAAGTTCATCCCTTGGTGTGGAAATGGCTAGAGGTATTTTTGAAAAAGCGATTTGATTGGGATCTTCACAGGTTGAATTACAAAGATGTGAGGAAATTTGCAATTTTACGTGGCTTGTGTCACAAGGTGGGAATTGAGCTTGTTCCACGGGATTTTGATATGGATTCTCCGATTCCCTTCCACAAATCTGACATTGTCAGCTTGGTCCCTGTTCACAAGCAAGCTGCATGCTCATCTGCAGACGGAAGGCAGCTCCTGGAGTCATCCAAAACTGCTTTAGACAAGGGAAAGCTTGAGGACGCCGTTACCTATGGCACAAAGGCTCTTGCTAAGCTAGTGGCAGTTTGTGGTCCCTACCATCGAATGACAGCGGGAGCATACAGCCTCCTTGCTGTAGTTTTATATCATACTGGAGACTTCAACCAGGCTACAATATATCAACAAAAAGCTTTGGATATCAATGAGAGAGAGTTAGGTCTGGATCATCCTGATACCATGAAGAGCTATGGGGATCTTGCTGTTTTCTATTACAGACTACAGCACACAGAGCTGGCTCTGAAGTATGTAAAGCGTGCTTTATATCTTCTGCATCTAACATGTGGCCCATCTCATCCAAACACTGCTGCTACTTACATTAATGTGGCTATGATGGAAGAAGGTCTGGGAAATGTACATGTCGCTCTCAGATATCTTCACAAAGCTTTAAAGTGCAACCAAAGATTACTTGGCGCAGATCATATTCAGACAGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCATTGATGGAAGCATATCCATTGAGCGTGCAACATGAGCAAACAACTTTGCAAATTCTGAGGTCAAAACTTGGTCCTGATGACTTGCGAACACAGGATGCTGCAGCTTGGTTGGAGTATTTTGAGTCCAAGGCTTTTGAACAGCAAGAAGCTGCTCGAAATGGTACTCGGAAACCTGATGCATCAATAGCTAGCAAAGGCCATTTGAGTGTGTCAGATTTGCTTGACTATATTAATCCTAATCATGATGCTAAAGGGAGAGATGCGGCAACAAAGAGAAGGGGCCAGATAACAAAGGTGAGAGCGACATCCTACCTTAACCTTGGCATGTCAAGTTCTGATGAGTCTTCAAAAGAAATTCCTAAAGAGGCTTCAGATGAAGAGGTACAAATACCTGTAGCAGAAGGTAGTGCAGATTCTGAGCAGGAAAGCAACTCTGGACCTGACTCAGAACATACTATTTTAAAACAAATACCAGACGAAAAGCCACAAATTTATGATGAAATCTTGTCAGAAGCACATGCTGAAGGAGAAGATGGATGGCAACCAGTTCAACGACCAAGATCAACTGGCTTATATGGCCGGAGATTGAAGCAGAGAAGGGCAACACTTGGCAAAGTTTATAGTTATCAAAAGAATGTGGAAGTTGGAACAGAATCTCCTTTTGTACGGAATGCCAGTCCAAATAGTAGGTATTATTTCATGAAGAAGCGGACAATTTCCCATGGAGGTTATACGGATGATCATACAGGAAACATCACCCAAGGCCCTAAATTTGGAAGGAAAGTAGTTAAAGCTGTTACGTACAGGGTCAAATCCATACCCTCAACATCCAAGGCTAGTGCAAATGAGACGTTAGAAACAGGTGACAAGCTGTTTACGTCTCTTTCAGAACCTGATCCAATTGATGTTAATCCAGTTAAGAATTCTATTGTTAGTCTTGGAAAGTCTCCTTCATACAAGGAAGTGGCGTTAGCTCCACCAGGGACAATCTCCAAGTTCCAGGTCTATAATCCTCCAAGTGAGATTTCTGTTAGCAGTGAACATGATAGTGGCAAAGCTGAAGAGGAAGATATTGAAGCTAATAGGGATGCTAATCCAACCCCGGCTGAGGCAAATGATATGAATAAAGAGAAGAACAATAATTCTGTTTCAGATTCTGTTGATGATTCACAGGATGATACCGGAGTTACTACTGAGAAGAAAGAGGAAACTCAGTTAATTGTTGCTGTGCAAGATGATTGTATGAGTGCTGATGGGAAATTAGGAGATGTTGAAGCACAAGGAGCAACCGATAATAGCATATTGATTCAGGCAGTAGATGATCACGTGGACTCTACCAAAAAAGAACTCGATGCAAGTAATTCATCTGGCAGTTTGGAACCCAGTGATAGTACAAATCCCATTTCCCAAGGTGGCGAGGATTTAAGGGTCAATGTGTCATCATCAAATCAGAGTCACACTGGGGGCATCCCATATAAGAAACTGTCCGCATCTGCAGCTCCATTCAACCCATCGCCTGCCATTGCACGTGCTCCACCAATTGCCATAAATATGACTCTTCCTTCTGGTCCTAGTGCAGTTCCTGCAATTGGCCCCTGGCCAGTAAACATGAATGTTCATCCTGGACCTACTACTGTGCTGCCCGCAGTAACCCCCATGTGCTCCTCTCCTCACCATGCATATCCATCGCCTCCAACTACACCAAACATGATGCAACCACTGCCATTTATGTATCCTCCTTACACTCAACCTCAATCAGTGCCACCTAGCAACTTTCCGGTCAGTAGCAATGCCTTTCATGCGAATCATTTTACCTGGCAATGTAATTTGAACCCTGCAGTATCTAAGTTTGGTCCCGGTGCTGTTTGGCCTGGTTGTCATCCCATGGAGTTTCCTCTTCCGTTACCTATTGTGGAACCAATCCCTGATCCCATTTCAGAGTCACAAGTTCTGTGTCATGGTTCTGAAAGTCCAAGTTCAGCTTCAGTTCTTCCTGAGGACATTGATAATGTTGGTGATTCTAATCAATTGGTAAAAACTTTAACATCAGACACGAGTGAAGATGAAGCAGTGAGAGCTGGTTCAGAAAGCCTAAAAGAAAATGATGATATGAATTTACATGGGACTGAAAATTCTGGGAACAAACAAAATCAAAACATTGGTTCAAATGGCAACTCTGGCAGTACTGAAACAAACGTGGATGGCGAGAAAACCTTCAGCATTTTGATTCGGGGGAGAAGAAATCGAAAGCAGACTCTGAGAATGCCAATAAGTTTGCTTACTCGACCTAATGGCTCACAGTCATTTAAGGTTATTTATAACCGTGTAGTTAGAGGAAGTCATGCTTCCAAGTCTATCAATCTCTCGTCTAGTAAAGATTGTACTGCTACTGCTTGA 5529 0.4334 MAPRNSRGKAKGEKKKKEEKVLPVVIDITVKLLDETHVLKGISTDRIIDVRRLLSVNTDTCYVTNFSLSHEVRGPRLKDTVDVSALKPCLLTLVEEEYNEERAVEHVRRLLDIVACTTSFGPSPPPKNAAGTVTKSGKSEIPPAKDAAVTVADVDGEISHSCPKLENFYEFFSLSHLTAPIQYVKKGSRRRVEEISEADYLFSLDVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQLSRAFDNAFDDLLKAFSERNKFGNLPYGFRANTWLVPPVAAQSPSSFPPLPVEDETWGGNGGSLAKDGKYDLIPWAKEFSVIASMPCKTAEERQVRDRKAFLLHSLFVDVSIFRAIRAVKHVMEEPNFSCSVVENNIVYTERVGDLSIKVLENGSVASSKIDTKIDGVEATGVNQKDLIERNLLKGITADENTAAHDITTLGVVNVRYCGYVVVVKVEGGVRENVDSPSQQTIELFDQPEGGANALNINSLRLLLHNTTLPENNKPMIQIKTFESEETGASHSFVEKLIKESLAKLEEEEPGMDYFVRWELGACWMQHLQDQNNNTEKDKKPSLEKAKNEMKVEGLGKPLKALKNFKKKSDSSNITSASEYPKFSRESESPPLPSIESQHETTEAENELVLKRMLSEEAFTRFKETGTGLHCKSMHDLIDLSQKYYKDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILRAVISSVNKEKMASSIAGALNFLLGVPGKRDSDKSHEVHPLVWKWLEVFLKKRFDWDLHRLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSPIPFHKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRSKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNHDAKGRDAATKRRGQITKVRATSYLNLGMSSSDESSKEIPKEASDEEVQIPVAEGSADSEQESNSGPDSEHTILKQIPDEKPQIYDEILSEAHAEGEDGWQPVQRPRSTGLYGRRLKQRRATLGKVYSYQKNVEVGTESPFVRNASPNSRYYFMKKRTISHGGYTDDHTGNITQGPKFGRKVVKAVTYRVKSIPSTSKASANETLETGDKLFTSLSEPDPIDVNPVKNSIVSLGKSPSYKEVALAPPGTISKFQVYNPPSEISVSSEHDSGKAEEEDIEANRDANPTPAEANDMNKEKNNNSVSDSVDDSQDDTGVTTEKKEETQLIVAVQDDCMSADGKLGDVEAQGATDNSILIQAVDDHVDSTKKELDASNSSGSLEPSDSTNPISQGGEDLRVNVSSSNQSHTGGIPYKKLSASAAPFNPSPAIARAPPIAINMTLPSGPSAVPAIGPWPVNMNVHPGPTTVLPAVTPMCSSPHHAYPSPPTTPNMMQPLPFMYPPYTQPQSVPPSNFPVSSNAFHANHFTWQCNLNPAVSKFGPGAVWPGCHPMEFPLPLPIVEPIPDPISESQVLCHGSESPSSASVLPEDIDNVGDSNQLVKTLTSDTSEDEAVRAGSESLKENDDMNLHGTENSGNKQNQNIGSNGNSGSTETNVDGEKTFSILIRGRRNRKQTLRMPISLLTRPNGSQSFKVIYNRVVRGSHASKSINLSSSKDCTATA 1842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02158 1842 MobiDBLite consensus disorder prediction 1694 1708 - -
Viun10g02158 1842 Pfam Mitochondrial function, CLU-N-term 44 114 IPR028275 -
Viun10g02158 1842 SUPERFAMILY TPR-like 872 1049 IPR011990 GO:0005515
Viun10g02158 1842 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 862 1112 - -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 1489 1536 - -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 1416 1435 - -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 1149 1172 - -
Viun10g02158 1842 SUPERFAMILY Hypothetical protein c14orf129, hspc210 182 263 IPR023231 -
Viun10g02158 1842 SMART tpr_5 991 1024 IPR019734 GO:0005515
Viun10g02158 1842 SMART tpr_5 907 940 IPR019734 GO:0005515
Viun10g02158 1842 SMART tpr_5 949 982 IPR019734 GO:0005515
Viun10g02158 1842 MobiDBLite consensus disorder prediction 1751 1777 - -
Viun10g02158 1842 Pfam Translation initiation factor eIF3 subunit 135 695 836 IPR033646 -
Viun10g02158 1842 ProSiteProfiles Clueless (Clu) domain profile. 295 572 IPR025697 -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 1693 1777 - -
Viun10g02158 1842 Gene3D Tetratricopeptide repeat domain 980 1100 IPR011990 GO:0005515
Viun10g02158 1842 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 10 1443 IPR027523 GO:0006996
Viun10g02158 1842 Pfam Tetratricopeptide repeat 906 976 - -
Viun10g02158 1842 Pfam Tetratricopeptide repeat 990 1065 - -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 1729 1750 - -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 1391 1407 - -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 601 616 - -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 1494 1535 - -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 564 584 - -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 1384 1448 - -
Viun10g02158 1842 MobiDBLite consensus disorder prediction 599 638 - -
Viun10g02158 1842 CDD CLU-central 697 837 IPR033646 -
Viun10g02158 1842 Gene3D Tetratricopeptide repeat domain 866 979 IPR011990 GO:0005515
Viun10g02158 1842 ProSiteProfiles TPR repeat profile. 907 940 IPR019734 GO:0005515
Viun10g02158 1842 MobiDBLite consensus disorder prediction 565 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02158 Viun-Chr10 36410875 36427232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02158 K03255 - gmx:100808136 3133.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02158 10 36410875 36427232 Viun10g02158 10 36410875 36427232 ECH