Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02152 ATGTTGACGATGATCATCGTTGCGCTCATCACGGCCATACTTTTTGGATTCTGCATTGTTCCAGTCAACGGCAGGCGGCGGAGGAACAGAGCCGTCGGATTCTTTCATCCGTATACTAACGACGGCGGCGGTGGGGAGAGGGTGCTCTGGTGCGCCGTCAGAGGCATCCAAGATGAGATCCCTGACCTTGACTGCTGTATCTACACCGGAGATCATGACGCCACCCCTCAGTCGCTGATGGCTCGAGCCCTAGATCGCTTTGGGGTCACGCTCCTCTCTCCTCCAAAGGTGATTCATTTGTACAAGAGGAAGTGGATCGAAGAAACCACTTATCCGCACTTTACAATGATTGGTCAAAGTCTGGGTTCTATGTATCTTGCTTGGGAGGCTTTGTCCAAGTTTACTCCTTTATATTACTTTGACACAAGTGGATATGCTTTTACATATCCACTTGCCCGGTTGTTTGGATGTAAAGTTATTTGCTATACACATTATCCTACTATCAGTTCAGACATGCTATCTCGTGTTCGTGATCGCAGCTTGATGTATAATAATGATGCCTTAATTACCAAGAGTGTTTGGCTGTCAAGATGCAAAATAGTCTATTATACATTCTTCAGCTGGTTGTATGGGATTGTAGGATCATGTGCACACCTGGCTATGGTCAATTCATCTTGGACCAAATCCCATATTGAAAGTCTTTGGAGAGTTCCAGATCGTATTAAGCGAGTATATCCTCCTTGTGATACTTCAGGACTCCAGGTACTTCCCTTGGAACGATCAACGGAAATTCCTATAATAATATCTGTTGCACAATTTCGACCGGAGAAGGCACACACTCTCCAACTTGAGGCTTTTTCAGCTGCCATTAAGAGATTAGATCCTACCTTGCCAAAACCTAAGTTCCAAATTGTGGGTAGCTGTAGAAATAAATCAGATGATGACAGACTTCAAATGTTAAAAAAGAAAGCAATTGAGCTGAATATTAGTGAACAAGTGGAATTTCACAAGAATGTGACATACAGAGATTTGGTGGGACTTTTAGGGGGTGCTGTTGCTGGGATTCATTCAATGACAGATGAGCATTTTGGCATTAGTGTTGTAGAATACATGGCCGCCGGTGCTATCCCAATTGCTCATAATTCTGCTGGCCCAAAAATGGACATTGTGCTAGATGAAGATGGACAGCAAACAGGATTTCTTGCCTGCACTGTTGAAGAATATGCAGACGCCATTGTGAGGACAGTAACAATGTCGGAGACAGAGAGACTTAAGGTGGCTGCAGCTGCAAGGAGAAGGGCAAGGAGATTTTCTGAGCAGAGGTTTTATGATGACTTCAAAGCTGCAGTGCGTTCTATCCTGTCTCATGTTTCTAGGTGA 1380 0.4442 MLTMIIVALITAILFGFCIVPVNGRRRRNRAVGFFHPYTNDGGGGERVLWCAVRGIQDEIPDLDCCIYTGDHDATPQSLMARALDRFGVTLLSPPKVIHLYKRKWIEETTYPHFTMIGQSLGSMYLAWEALSKFTPLYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLSRVRDRSLMYNNDALITKSVWLSRCKIVYYTFFSWLYGIVGSCAHLAMVNSSWTKSHIESLWRVPDRIKRVYPPCDTSGLQVLPLERSTEIPIIISVAQFRPEKAHTLQLEAFSAAIKRLDPTLPKPKFQIVGSCRNKSDDDRLQMLKKKAIELNISEQVEFHKNVTYRDLVGLLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDGQQTGFLACTVEEYADAIVRTVTMSETERLKVAAAARRRARRFSEQRFYDDFKAAVRSILSHVSR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02152 459 Pfam Glycosyl transferases group 1 263 421 IPR001296 GO:0016757
Viun10g02152 459 Pfam ALG11 mannosyltransferase N-terminus 30 235 IPR031814 -
Viun10g02152 459 PANTHER GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE 25 455 IPR038013 GO:0004377
Viun10g02152 459 FunFam GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase 256 437 - -
Viun10g02152 459 CDD GT4_ALG11-like 30 445 IPR038013 GO:0004377
Viun10g02152 459 Gene3D Glycogen Phosphorylase B; 253 437 - -
Viun10g02152 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 33 454 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02152 217 442 Glycosyltransferase AT1G78800 25.751 3.87e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02152 K03844 - gmx:100801617 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02152 10 36347339 36356795 Viun10g02152 10 36347339 36356795 ECH