Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02115 ATGACTGATGCAAATGGTGGGACCGGGGCTGGGACTGAGGAGCACAAGAGAAAAACTAATGAATCTTTTCTTAAGAATGGGGGTCAGCAAAACATGTCAAAATCACCTAGATTGTGCACACCTATTAAGAAGGAGTGGTCAGAGAGTTTGCCAAATGACAATGTGATTGGTAATCAGGACAATGGTGTGAATAGGAATTATAAGAACAAGAATCCAGAGTTAGTTACTCACCCACATAATTCAAGACAGACAAGGAATCAGTTGACTGTTGAGTCTAAGTATAATGACATAAATAGAGAAGTTGTTTCCGAGGTTGAAGAACAGATACCATTCAGATTAAGTAAGGTACTTAAGGGAAAGGATTTTGAAGTTTGGGACCTGAAGCCTTTGTCTGGTAAGAGTGTAAATCAGACTATAATCTCAAACAATGCACATCTTATTAGCAGTATAACTCAGAGTACTTCATCTGCATATAACTATCCTCAATTGATTGTAAAGCAAACAAGGAAGGGAAAGGAGGTTATTTGTGAAGATTTAGAAAAAAGCTTCAGCATTGTAGGAGCACACAAGAGCCTGCAGCATGAGAAACCTTTTGCAGCCACGTTTCAATCTGATACACTGAGGAGATCAAATGTTGATGATGATGATGATAATAAGCCTTTAGTGGAAGAAACTGTAGTGTCTGGTAGCAATGAAATAAACTTGAGAGAGTGGCTGAAATCTGAATGTCATAACATGAAGAAATTAGGAAAAATTCATATATTTAAGCAGGTATTGGAATTGGTTGATTCTGCACACTCCCAGGGACTTGTCTTGCTAGACTTTACACCATCTTGTTTCACTTTATTGTCTTCAAGTAAGATTAAGTACATTGGTTCATACGGCCAACAACGGTTAGGTAATGAAGTCATGACCTGCAATGTGACTAGGAAAAGGCCTCTGGAACAGAATACCTGTGCTTGCCAAAGTTCAAGTACAAAGCAGCAAAAACTGTTTGAAGAAACAGGATCTTTTAGGAAGTTGCATCAATGCTCCTCTACTCATGGCTTCAGGAGAATAGTGAATCAAACTGACTCTGACACAATCAAACCCTTGGAATCAAGGAGTAAAGATATTTCTAATTGTCAACATACTTTTACCATAGAAAATCAGTTTATGTCTGCTACCATTCCATTAGAAGAGAAGTGGTATTGTAGTCCAGAAATGCTGAATGATGGAGTCTGCACCTTGTCATCTAATATTTATAGCCTTGGAGTTCTTCTTTTTGAATTGCTGTGCAATGTTGAGTCAAGGGAGGCACATTCAACTGCGATGTTGGAGTTGTGTCATAGAATCTTACCACCTAAGTTTCTAGCAGAAAATCCAAAGGAAGCTGGCTTTTGTCTCTGGCTTCTGCATCCTGAACCATCCTCTCGTCCTAATGCTAGGATCATTTTAGAATCTGAGTTTATACGAGAATCAGAGGAATCAAGCTCTATAGATGATGTTGGAATATCTGACGATGAGGCTGAAACAGATAAACTACTACACTTTCTAACTTCACTCAAAGAAGAAAAGATGATACAGGCTTCCAAGTTAGAAGAACAGCTGAATTTGCTGAATGAAGATATTCAGGAGATAGAAAGAAGATATCCATTTGGTACAGATTCAGTATTTCCTTTGGCACAAATGAAAAATTCAGAAGTGAGTGAGAACAACAATTTTCATTTTCAAGATTCTTCTAGTTCAGACATGAGTAGATCCATTCAAAGGTCATTTGGTGATGAAGAAAGATTTATGGCTAACATAAGTCAGCTAGAGAATTCGTATTTTTCTTCAAGAATCCGAGTCCTGCCAAAAGATGCTTCATCTATTCCAAGCAATGATAAAAACCTGATGGAAAAGCATGCTGCTAATAAGGAGCCTAGAAGAATAAGTACTTCTGTTGGTTGTCTAGGATCCTTCTTTGAAGGTTTATGCAAGTTTGCTCGTTGCAGCAAGTTTGAAGAGCGTGGCAGATTAAGAAATAGAGATCTGCTTAGTTCTTCCAATGTAATGTGTGCTTTAAGTTTTGACCGTGATGAAGATTACATGGCAGCAGCAGGAGTTTCAAAGAAAATCAAGATTTTTGACCTCAATGCTATTTCAAGTGATTCTGTTGACATTCAATACCCATTGGTTGAGATGACAAATAAATCAAAGCTTAGCTGTGTGTGCTGGAACACCTACATCAAAAATCACCTGGCATCTACTGACTATGATGGTGTTGTTCAGATGTGGGATGCAGACACTGGTCAGCCATTGTCTCAATACATGGAGCACCAAAAGAGAGCTTGGTCTGTTCATTTTTCTCTGTCAGACCCAAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTGTCAAACTGTGGAATATCAGCGAGAAAAATTCTCTGGGAACCATCTGGAACCCTGCCAATATATGCTGTGTTCAGTTCTCTTCTTACTCAACAAATCTTTTATTTTTTGGATCAGCTGATTACAAGGTTTATGGTTATGATCTTCGTCACACTAGGATTCCGTGGTGCACATTAGCTGGTCATGGAAAAGCTGTTAGTTATGTAAAATTTTTAGACGCTGAAACAGTTGTCTCTGCTTCCACTGACAACTCTTTGAAGCTTTGGGACCTGAAGAAAACCAGCTCTTCTGGTTTGTCCTCTGATGCTTGTGTCTTAAACTATAAAGGTCATAGTAATGAAAAGAATTTTGTGGGATTATCTGTTTTGGACGAATACATTGCATGTGGTTCAGAATCTAATGAGGTGTACTGTTATCACAAATCACTGCCTATGCCAATTGCTTCTCACAAATTTGAGTCAATTGATCCTATTTCTGGTCATCTAAATAGTGGTGATAATAGTGGACAGTTTGTTTCTAGTGTTTGCTGGAGAAAGAAATGTAACATGCTTGTTGCGGCCAACTCAGTTGGAATTGTGAAACTGTTGCAGATGGTCTGA 2973 0.3845 MTDANGGTGAGTEEHKRKTNESFLKNGGQQNMSKSPRLCTPIKKEWSESLPNDNVIGNQDNGVNRNYKNKNPELVTHPHNSRQTRNQLTVESKYNDINREVVSEVEEQIPFRLSKVLKGKDFEVWDLKPLSGKSVNQTIISNNAHLISSITQSTSSAYNYPQLIVKQTRKGKEVICEDLEKSFSIVGAHKSLQHEKPFAATFQSDTLRRSNVDDDDDNKPLVEETVVSGSNEINLREWLKSECHNMKKLGKIHIFKQVLELVDSAHSQGLVLLDFTPSCFTLLSSSKIKYIGSYGQQRLGNEVMTCNVTRKRPLEQNTCACQSSSTKQQKLFEETGSFRKLHQCSSTHGFRRIVNQTDSDTIKPLESRSKDISNCQHTFTIENQFMSATIPLEEKWYCSPEMLNDGVCTLSSNIYSLGVLLFELLCNVESREAHSTAMLELCHRILPPKFLAENPKEAGFCLWLLHPEPSSRPNARIILESEFIRESEESSSIDDVGISDDEAETDKLLHFLTSLKEEKMIQASKLEEQLNLLNEDIQEIERRYPFGTDSVFPLAQMKNSEVSENNNFHFQDSSSSDMSRSIQRSFGDEERFMANISQLENSYFSSRIRVLPKDASSIPSNDKNLMEKHAANKEPRRISTSVGCLGSFFEGLCKFARCSKFEERGRLRNRDLLSSSNVMCALSFDRDEDYMAAAGVSKKIKIFDLNAISSDSVDIQYPLVEMTNKSKLSCVCWNTYIKNHLASTDYDGVVQMWDADTGQPLSQYMEHQKRAWSVHFSLSDPKMFASGSDDCSVKLWNISEKNSLGTIWNPANICCVQFSSYSTNLLFFGSADYKVYGYDLRHTRIPWCTLAGHGKAVSYVKFLDAETVVSASTDNSLKLWDLKKTSSSGLSSDACVLNYKGHSNEKNFVGLSVLDEYIACGSESNEVYCYHKSLPMPIASHKFESIDPISGHLNSGDNSGQFVSSVCWRKKCNMLVAANSVGIVKLLQMV 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02115 990 SUPERFAMILY Protein kinase-like (PK-like) 233 487 IPR011009 -
Viun10g02115 990 MobiDBLite consensus disorder prediction 48 86 - -
Viun10g02115 990 MobiDBLite consensus disorder prediction 51 86 - -
Viun10g02115 990 ProSitePatterns Trp-Asp (WD) repeats signature. 868 882 IPR019775 -
Viun10g02115 990 Gene3D - 648 990 IPR015943 GO:0005515
Viun10g02115 990 Pfam WD domain, G-beta repeat 759 797 IPR001680 GO:0005515
Viun10g02115 990 Pfam WD domain, G-beta repeat 849 881 IPR001680 GO:0005515
Viun10g02115 990 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 850 883 - -
Viun10g02115 990 PRINTS G protein beta WD-40 repeat signature 741 755 IPR020472 -
Viun10g02115 990 PRINTS G protein beta WD-40 repeat signature 784 798 IPR020472 -
Viun10g02115 990 PRINTS G protein beta WD-40 repeat signature 868 882 IPR020472 -
Viun10g02115 990 PANTHER PROTEIN SPA1-RELATED 2 30 990 IPR044630 GO:0009640
Viun10g02115 990 SUPERFAMILY WD40 repeat-like 676 986 IPR036322 GO:0005515
Viun10g02115 990 MobiDBLite consensus disorder prediction 1 36 - -
Viun10g02115 990 SMART serkin_6 111 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02115 990 Coils Coil 516 543 - -
Viun10g02115 990 ProSiteProfiles Protein kinase domain profile. 125 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun10g02115 990 ProSiteProfiles Trp-Asp (WD) repeats profile. 764 806 IPR001680 GO:0005515
Viun10g02115 990 SMART WD40_4 669 704 IPR001680 GO:0005515
Viun10g02115 990 SMART WD40_4 942 988 IPR001680 GO:0005515
Viun10g02115 990 SMART WD40_4 800 839 IPR001680 GO:0005515
Viun10g02115 990 SMART WD40_4 757 797 IPR001680 GO:0005515
Viun10g02115 990 SMART WD40_4 843 881 IPR001680 GO:0005515
Viun10g02115 990 SMART WD40_4 715 754 IPR001680 GO:0005515
Viun10g02115 990 SMART WD40_4 892 931 IPR001680 GO:0005515
Viun10g02115 990 Gene3D Transferase(Phosphotransferase) domain 1 231 495 - -
Viun10g02115 990 ProSiteProfiles Trp-Asp (WD) repeats profile. 850 890 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02115 Viun-Chr10 35994456 36000632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02115 761 930 Miscellaneous Gene Families AT5G08390 25.581 3.95e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02115 K16240 - gmx:100799267 1508.43