Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02107 ATGCCGACGGGGCTACCGGCGGCGAACACCGTCGTCGCGAGCGACGACGAGGGCTGGGTGTGGGCGCAGATCAAGGCGGAGGCACGCCGCGACGCCGAGTCGGAGCCGGCGCTGGCGAGCTATCTGTACTCAACGATCCTCTCGCACTCCTCTCTCGAACGTTCTCTCTCGTTCCACCTCGGGAACAAGCTCTGTTCTTCTACGCTACTCTCCACTCTCCTCTACGACCTCTTCCTCAACGCCTTCTCCTCCGACCCCTCCCTCCGCTCCGCCGCCGTCGCGGACCTCCGCGCCGCGCGCGAACGTGACCCTGCCTGCGTCTCCTACTCTCACTGCCTTCTCAATTACAAAGGCTTCCTCGCCTGCCAGGCGCACCGTGTGGCACACCTGTTGTGGCGGCAATCGCGGCGGCCGTTGGCATTGGCACTGCATTCTCGGATTGCTGATGTGTTTGCGGTGGATATTCACCCGGCGGCGAGGATTGGGAAGGGGATTCTGTTTGATCATGCCACCGGGGTGGTGGTGGGGGAGACGGCGGTGATTGGGAACAATGTGTCGATTCTGCACCATGTTACGCTGGGCGGGACTGGCAAGGTTGGTGGTGACAGGCATCCCAAGATTGGGGATGGGGTGCTTATTGGTGCTGGTGCTACAATTCTGGGAAATATTAAGATCGGGGAAGGTGCAAAGGTTGGTGCTGGCTCGGTGGTTTTGATCGACGTGCCGGCGAGGACCACCGCAGTTGGGAACCCGGCGAGGTTGGTCGGTGGGAAGGAGACACCCTCTAAGCATGAGGATGTGCCTGGGGAGTCCATGGACCATACTTCCTTTATCTCTGAGTGGTCAGATTATATCATTTGA 861 0.6028 MPTGLPAANTVVASDDEGWVWAQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFSSDPSLRSAAVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIADVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPARTTAVGNPARLVGGKETPSKHEDVPGESMDHTSFISEWSDYII 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02107 286 Pfam Hexapeptide repeat of succinyl-transferase 171 187 IPR001451 -
Viun10g02107 286 SUPERFAMILY Trimeric LpxA-like enzymes 19 256 IPR011004 -
Viun10g02107 286 MobiDBLite consensus disorder prediction 254 273 - -
Viun10g02107 286 CDD LbH_SAT 151 251 IPR045304 -
Viun10g02107 286 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 213 241 IPR018357 GO:0016740
Viun10g02107 286 SMART SATase_N_2_a 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
Viun10g02107 286 Gene3D serine acetyltransferase, domain 1 1 153 IPR042122 -
Viun10g02107 286 FunFam Serine acetyltransferase 5 5 153 - -
Viun10g02107 286 NCBIfam serine O-acetyltransferase 94 253 IPR005881 GO:0005737|GO:0006535|GO:0009001
Viun10g02107 286 FunFam Serine acetyltransferase 154 279 - -
Viun10g02107 286 Pfam Bacterial transferase hexapeptide (six repeats) 204 237 IPR001451 -
Viun10g02107 286 Gene3D Hexapeptide repeat proteins 154 274 - -
Viun10g02107 286 PANTHER SERINE ACETYLTRANSFERASE 12 286 - -
Viun10g02107 286 Pfam Serine acetyltransferase, N-terminal 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02107 Viun-Chr10 35899758 35901643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02107 20 274 Miscellaneous Gene Families AT2G17640 56.863 6.45e-92 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02107 K00640 - gmx:547632 552.362