Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02104 ATGAAGGCTCTAAGACTTCTCTTCGTGATTACTTTTCTTTGTTCATTCTTCCTTGCAAGTACAGAACCAGACTCGTGTACCAGCAATCTAAGCCTCAATGTTTCCGTCCCCTTTGATACAACCAACCTTCGCTGCCTTTCTGTATGGGATGCTCAAAGTTTCATCCTCAGATATGCTCAGACTTATGCAAACATTTGGAGTTTCATTCTCTCTACCCCAGACACAAATTCTTACATAGCCATGGGATTCTCTGTCAGTGGCGGCATGGTTGGTTCAAGTGCCATGGTGGGGTGGGTGGAATCAAGAGGAGCCAGTGGAGGGATCAAGCAGTATTATCTTGGTGGGGTCACTCCAAATCAGGTGGTTCCTGATAAGGGCAACCTACAGGTGATAGCCAATTCAGCCTTCATCACTCTACAGAACTCTCGTCTGTTCATGGTGTTTCAGTTACAAACCGCTGATCCTTTGTCCTCGCTGATATTTGCCACTGGATCCACCGGTTTATTCCCTGCACCACCAAGCTTTGCACTAACCAAACACTTAGACAAGATTTCCACAAGAATAGACTACTCAAAAGCCAACATTGGAAGTTCACAAGGGGATGGAAATTCTTCACAAGTAGATGGAAGTACTTCACAAGCAGCAGACTCCTGTGTCTCCAAGCTAAACCTCAGTGTTCCTCTCCTCTTCGACACAACCAATCTCAATTGTCTTCCTGTTTGGAATGCTCAGGGCTACATCCTCAGATATTCTCAGACTTCTCCAAACATATGGAGCTTCATTCTCTCTGCACCGAACACAAATTCTTATATAGCAATGGGGTTCTCTCCCAATGGAGGGATGGTGGGTTCAAGTGCCATTGTGGGGTGGATCTCATCCAATGGGGCAGGTGGAGGCATGAAACAATATTATCTAACAGGACTCGCACCAAACCAAGTGGTGCCAGATAGAGGCAACTTAAAAGTTCTCACCAACTCAACCTTCATTACATCACAGTCCTCACGTTTGTACATGGCCTTCCAGTTACAAACAAACCAACCTCTGTCGCGCTTGATTTATGCCTTTGGACCTAACGGTGTGTTCCCTTCACCACCAAGTTTTGCATTAACACACCACCAAGACAAAGTCTCCATTACGTTGAATTACGCAACAGGTTCGAGTGCATTAGGAAACTCATATATGAACCTGAAAAGAAGCCATGGAGTGCTGAATATCTTGGGATGGGGCATCCTAATCATAATGGGAGCAATAGTTGCTCGTTACTTCAGGGAATGGGATCCATTTTGGTTTTATTTTCACGCTTCAGTTCAATTCTTGGGTTTTGTTCTGGGAGTAATTGGTGTAATCAGTGGTTTTGTGTTGAATAATCAACTCCATGTTGACGTTACTCTTCACAAGGCTCTTGGAATCATCATTTTCGTTCTAGCCTGTTTCCAGGTAATGGCTTTGCTTGGTCGACCAAAGAAGGAATCGAAAGTGAGAAAGTATTGGAATTTATACCATCATAACATGGGGAGAATTTTGATTATACTAGCTGTGGCTAACATTTTCTATGGAATCCAATTAGGGAAGGAGGGAAATGGATGGAATATAGGTTATGGGATTGTGCTGGCCATATTACTTACAATGGCACTTACTTTTGAGACACAACTCTGCAGTAAAGACTGA 1668 0.4371 MKALRLLFVITFLCSFFLASTEPDSCTSNLSLNVSVPFDTTNLRCLSVWDAQSFILRYAQTYANIWSFILSTPDTNSYIAMGFSVSGGMVGSSAMVGWVESRGASGGIKQYYLGGVTPNQVVPDKGNLQVIANSAFITLQNSRLFMVFQLQTADPLSSLIFATGSTGLFPAPPSFALTKHLDKISTRIDYSKANIGSSQGDGNSSQVDGSTSQAADSCVSKLNLSVPLLFDTTNLNCLPVWNAQGYILRYSQTSPNIWSFILSAPNTNSYIAMGFSPNGGMVGSSAIVGWISSNGAGGGMKQYYLTGLAPNQVVPDRGNLKVLTNSTFITSQSSRLYMAFQLQTNQPLSRLIYAFGPNGVFPSPPSFALTHHQDKVSITLNYATGSSALGNSYMNLKRSHGVLNILGWGILIIMGAIVARYFREWDPFWFYFHASVQFLGFVLGVIGVISGFVLNNQLHVDVTLHKALGIIIFVLACFQVMALLGRPKKESKVRKYWNLYHHNMGRILIILAVANIFYGIQLGKEGNGWNIGYGIVLAILLTMALTFETQLCSKD 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02104 555 Pfam Eukaryotic cytochrome b561 400 520 IPR006593 -
Viun10g02104 555 ProSiteProfiles Cytochrome b561 domain profile. 363 555 IPR006593 -
Viun10g02104 555 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 215 552 - -
Viun10g02104 555 Gene3D - 374 552 - -
Viun10g02104 555 CDD DOMON_DOH 244 377 IPR045266 -
Viun10g02104 555 CDD DOMON_DOH 52 180 IPR045266 -
Viun10g02104 555 CDD Cyt_b561_FRRS1_like 377 548 - -
Viun10g02104 555 SMART DOMON_3 270 356 IPR005018 -
Viun10g02104 555 SMART DOMON_3 78 164 IPR005018 -
Viun10g02104 555 ProSiteProfiles DOMON domain profile. 52 164 IPR005018 -
Viun10g02104 555 ProSiteProfiles DOMON domain profile. 244 356 IPR005018 -
Viun10g02104 555 SMART 561_7 399 520 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02104 Viun-Chr10 35882906 35889706 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02104 - - gmx:100803524 988.793