Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02081 ATGGGTACCCTTAAGGTGTCCAAAAGTTCATGCACATTTTCAAAATTCTTAGTAATTTGCATGGTGGCATTTTCTTTGGTTGATTCAAGTTATTGTAAGTGTGATTTTGGGGGCATCTTCAATTTTGGGGATTCAAATTCGGATACGGGTGGGTTTCATTCGGCCTTTCCTGCACAACCTGGTCCCTATGGAATGACTTTTTTCGAAAAACCAGTTGGTCGTGCTTCTGATGGAAGACTCATTCTTGATTTTCTTGCTCAAGGTCTAGGACTTCCATTTTTGAGCCCATATCTTGAGTCAATTGGATCAGACTATAGCCATGGAGCTAACTTTGCATCTTCAGCTTCCACTGTGATTCCTCCCATTGCTTCCTTCTCTCATAGTGGGCTCAGTCCCTTTTCCCTTTCCATTCAACTCAACCAAATGAAGCAATTCAAAGCCAGAGTTGATGAATTTCATCAAATAGGAACTACATCATCATCTGGTATTCCTTCACCAGATATATTCAAAAAGGCCATTTACATGTTAAATATTGGCCAAAATGATCTCACTTCCAAAATAGCAGGCACTGGTACTATTGATGGAGTCATGGACACCTTTCCTCAAATTGTTTCACAAATTAATGATGCCGTCAAGGAGCTTTATGCACAAGGGGCACGCACAATTATGGTATTCAATCTTGGTCCTGTGGGATGTTATCCGGGATATTTGGTGCAGCTTCCTCATGCTGTTACTGATTTTGATGAGTTTGGATGCATGGCTTCATACCAGAATGTTGTAAATTATTACAACAAATTGTTGAAGGATACATTGAGCCAAACCAGACAAAGTTTACCAGATGTTTCCCTCATTCATGTAGACACTTACTCTGCTTTGTCGGAGCTCTTTCACCATCCCACACTTTATGGGTTTAAGTATGGTACCAAAACATGTTGTGGACATGGAGGGGGTGACCACAATTATAACCCTAAAATTTTGTGTGGTAATATGCTAGCAAGTGCTTGTGCTGAACCTCGAGAATATGTGAGTTGGGATGGGATCCATTTCACAGAAGCAGCAAACAAGATTGTTGCAAATGCTATTCTAAATGGTTCTCTTTTTGACCCCCCTTTCCCTCTCCATGAACTTTGTGATCTACAACCTATTGCTTGA 1152 0.4062 MGTLKVSKSSCTFSKFLVICMVAFSLVDSSYCKCDFGGIFNFGDSNSDTGGFHSAFPAQPGPYGMTFFEKPVGRASDGRLILDFLAQGLGLPFLSPYLESIGSDYSHGANFASSASTVIPPIASFSHSGLSPFSLSIQLNQMKQFKARVDEFHQIGTTSSSGIPSPDIFKKAIYMLNIGQNDLTSKIAGTGTIDGVMDTFPQIVSQINDAVKELYAQGARTIMVFNLGPVGCYPGYLVQLPHAVTDFDEFGCMASYQNVVNYYNKLLKDTLSQTRQSLPDVSLIHVDTYSALSELFHHPTLYGFKYGTKTCCGHGGGDHNYNPKILCGNMLASACAEPREYVSWDGIHFTEAANKIVANAILNGSLFDPPFPLHELCDLQPIA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02081 383 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 17 369 - -
Viun10g02081 383 Gene3D SGNH hydrolase 28 365 IPR036514 -
Viun10g02081 383 Pfam GDSL-like Lipase/Acylhydrolase 39 361 IPR001087 GO:0016788
Viun10g02081 383 CDD SGNH_plant_lipase_like 39 365 IPR035669 -
Viun10g02081 383 SUPERFAMILY SGNH hydrolase 173 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02081 Viun-Chr10 35765370 35768215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g02081 38 372 Acyl Lipid Metabolism Gene Families AT4G10950 27.536 4.45e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02081 - - gmx:100775514 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02081 10 35765370 35768215 Viun10g02081 10 35765370 35768215 ECH