Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01969 ATGCCGCAAGGGGATTACATAGAACGTCACCGAAGAGACTATGGCTACCGCCTCGATCAATTCGAGCGCAAGCGCAAGAAAGAGGCTCGGCAAGTTCACAAACGCTCCGCAATGGCCCAGAAGGCCCTTGGTATCAAGGGGAAGATTATTGCCAAGAAAAATTATGCAGAAAAGGCGCAGATGAAGAAAACTTTGGCCATGCATGAAGAGTCAACATCCAGGCGCAAGGCTGATGATAATGTTCAAGATGGCGCCGTTCCTGCTTATCTTCTGGACCGTGATAACACTGCCAGAGCAAAGGTTCTCAGCAACACCATTAAGCAAAAGAGGAAGGAGAAGGCTGGAAAGTGGGATGTTCCTCTACCCAAGGTTCGTCCTGTGGCTGAAGATGAAATGTTCAAAGTGGTCCGGACTGGTAAAAGAAAGACCAAGCAATGGAAGAGGATGGTTACTAAAGCTACATTTGTTGGGCCTGGTTTTACCAGGAAGCCTCCAAAGTATGAGAGATTCATTCGTCCAACAGGTTTGCGGTTTACCAAGGCCCATGTCATTCACCCAGAACTTAAATGCACGTTTAATCTAGAAATAATTGGAGTAAAGAAAAACCCTAACGGCCCTATGTACACCTCACTTGGTGTCATGACCAAGGGAACTATAATTGAGGTGAATGTCAGTGAACTTGGACTTGTCACACCTGCGGGGAAAGTTGTATGGGGTAAATATGCTCAGGTTACCAATAATCCAGAAAATGACGGTTGTATAAATGCTGTATTGCTTGTTTAA 783 0.4559 MPQGDYIERHRRDYGYRLDQFERKRKKEARQVHKRSAMAQKALGIKGKIIAKKNYAEKAQMKKTLAMHEESTSRRKADDNVQDGAVPAYLLDRDNTARAKVLSNTIKQKRKEKAGKWDVPLPKVRPVAEDEMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVIHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01969 260 PANTHER RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG 1 260 IPR039411 -
Viun10g01969 260 FunFam NSA2, ribosome biogenesis homolog 177 260 - -
Viun10g01969 260 CDD NSA2 4 260 IPR039411 -
Viun10g01969 260 Pfam Ribosomal protein S8e 35 259 IPR022309 -
Viun10g01969 260 Gene3D - 178 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01969 Viun-Chr10 34337001 34341020 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01969 K14842 - gmx:100801671 506.908