Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01895 ATGTCATTTTTGTGTGGGCTTCCTGTCCTTGAGTGTGTTTATTGTCTGGCCTGTGCTCGTTGGGCATGGAAAAAATGTCTGTACAGTGCAGGCTATGAGAGTGAAAATTGGGGGCTGGCTACTGCACAAGAATTTGAGCCTGTTCCTCGGATCTGTCGGCTAATCTTAGCCGTCTACGAAGATGATGTTCGTAACCCTCAATGGGCTCCCGAAGGAGGTTATGGCATTAATCCTGATTGGGTTATCTTGCGGAAGGACTACGGCGATAACCAAGGCCGTGTTACACCATACATGATATACCTTGATCATGATCATGCTGAAATCATACTAGCTGTCAGTGGACTCAATTTAGCAAAGGAAAGTGATTATGTTGTTTTGCTTGATAATAAGCTCGGACAAGCTGAATTTCATGGTGGTTATGTTCATAATGGGTTATTGAAGGCAGCTGGATGGGTTTTTGATGCAGAATATGAGGTTCTTAGGAAGCTAGTGGCAGAAAATCCAACTTATATGTTAATATTTACAGGGCATTCTCTAGGGGCTGGGGTGGTGGCATTGTTGACAATGCTAGCAGTTCATAATCGAGACAAATTGGGTATACCGAGAAATAAGATCAGATGCTTTGCAATAGCTTCTCCTCGGTGTATGTCTCTCAACTTGGCTGTAAGATATGCAGATGTGATCAATTCTGTTGTACTCCAGGATGATTTTTTACCTCGTACAACTGCTGCTTTGGAAGATGTCTTCAAATCACTTTTATGTTGGCCCTGTTTGTTGTGTATAATGTGCTTAAAGGATACCTGCACATTGGAGGAGAAGAAGCTCAGAGATCCAAGGCGTCTATATGCACCTGGTCGGCTCTATCACATTGTGGAGCGAAAACCATTTAGGTTGGGAAGATTTCCACCTGTTGTTAGGACAGCAGTACCTGTTGATGGGAGGTTTGAGCATTTAGTTCTTTCTTGCAATGCAACTTCTGACCATGCCATCATTTGGATAGAGAGAGAATCCCGACGGGCACTCAGTTTAATGCGAGACAGAGACGATCATATGGAGATTCCAGCAAAACAGAGGATGGAGAGGCATGAATCCATAGCTCGAGAACACAGTGAAGAGTACCATGCAGCCCTTCAGAGAGCAGTTGCTTTGGATATTCCACAAGCATACTCTCCTTCATCCTATGGAACATTTCATGAAATTGATGTTGGAGAGGATTCTGGAAGATCAAGTGAAGGTTCCTCCTTCTTTCATAAGAAAAGAACACAAAGTTGGAATGAATTTGTTGGACGTTTGTTTGATGTGGATGATTCAGGTCATATGGTGTTCAAAAAGACACCTCCATGA 1344 0.4308 MSFLCGLPVLECVYCLACARWAWKKCLYSAGYESENWGLATAQEFEPVPRICRLILAVYEDDVRNPQWAPEGGYGINPDWVILRKDYGDNQGRVTPYMIYLDHDHAEIILAVSGLNLAKESDYVVLLDNKLGQAEFHGGYVHNGLLKAAGWVFDAEYEVLRKLVAENPTYMLIFTGHSLGAGVVALLTMLAVHNRDKLGIPRNKIRCFAIASPRCMSLNLAVRYADVINSVVLQDDFLPRTTAALEDVFKSLLCWPCLLCIMCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKPFRLGRFPPVVRTAVPVDGRFEHLVLSCNATSDHAIIWIERESRRALSLMRDRDDHMEIPAKQRMERHESIAREHSEEYHAALQRAVALDIPQAYSPSSYGTFHEIDVGEDSGRSSEGSSFFHKKRTQSWNEFVGRLFDVDDSGHMVFKKTPP 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01895 447 Pfam Lipase (class 3) 116 242 IPR002921 GO:0006629
Viun10g01895 447 SUPERFAMILY alpha/beta-Hydrolases 44 251 IPR029058 -
Viun10g01895 447 CDD Lipase_3 44 240 - -
Viun10g01895 447 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
Viun10g01895 447 Gene3D alpha/beta hydrolase 39 250 IPR029058 -
Viun10g01895 447 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01895 Viun-Chr10 33708414 33717525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01895 1 445 Miscellaneous Gene Families AT3G49050 61.945 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01895 - - gmx:100800227 868.996