Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01872 ATGAAAACTGGTGCAGCTTCTGTTCATGTCATTCTCTTGCTGCTGGTTCCTGTAGCAAGCTTGTGGTTAGACAGTACTGAAGGTGCTACCTGCAGGCCCAGTGGGAGAATAAGGGGAGAAAAGCCTCCTCCAAGAAGATGCAACAGAGAGAATGATTCTGAGTGTTGCAGAAGGGGAAGGTCTTACCCCACATTCAAGTGTTCTCCACCTGTGTCTCACCACACAAAGGCAATTCTAACACTGAATAGCTTTGAGAAAGGTGGAGATGGAGGAGGCCCTTCTGAATGTGATAACAAGTTTCACTCAGACAACACTCCAGTTGTGGCATTATCAACTGGATGGTTCAATGACAGAAAAAGGTGTCATCACAACATCACCATCTTTGGAAATGGAAGAAGGGTCCATGCAGTTGTTGCCTCTCAAGCTGTTTGGAAGGCCTTGGGTGTTCCAAAAAGTCACTGGGGTGAATTAAACATTCACTGGTCTGATCAGTGTCGCCCCAGTGGCAGAATCATAGGAAAGAAACCCCCACCAGGAGAATGCAACCAAGAGAATGATTCAGAGTGTTGTGTGCAAGGCAAGGCCTACACAACATTCAAATGTTCTCCAGCAGTGTCGAGCAACACCAAGGCACAACTCACTCTCAACAGTTTTGAAAAGGGTGGAGATGGAGGAGGGCCTTCAGCATGTGACAACAAGTACCATTCTGATGACACACCAGTGGTTGCACTCTCCACTGGATGGTTTAACAACATGAGTAGGTGCCTCCACAATGTTACCATCTCTGCAAATGGGAGAAGTGTTGTGGCCATGGTGGTTGATGAGTGTGACTCCACCATGGGATGTGATGAAGACCATGATTATCAACCTCCTTGTCCCAACAACATTGTTGATGCCTCCAAGGCTGTCTGGAAAGCCTTAGGTGTTCCTCACAATCAGTGGGGGGGATTGCAAATTACATGGGCTGATGCTTAA 975 0.4718 MKTGAASVHVILLLLVPVASLWLDSTEGATCRPSGRIRGEKPPPRRCNRENDSECCRRGRSYPTFKCSPPVSHHTKAILTLNSFEKGGDGGGPSECDNKFHSDNTPVVALSTGWFNDRKRCHHNITIFGNGRRVHAVVASQAVWKALGVPKSHWGELNIHWSDQCRPSGRIIGKKPPPGECNQENDSECCVQGKAYTTFKCSPAVSSNTKAQLTLNSFEKGGDGGGPSACDNKYHSDDTPVVALSTGWFNNMSRCLHNVTISANGRSVVAMVVDECDSTMGCDEDHDYQPPCPNNIVDASKAVWKALGVPHNQWGGLQITWADA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01872 324 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 164 323 IPR039271 -
Viun10g01872 324 SUPERFAMILY Barwin-like endoglucanases 205 322 IPR036908 -
Viun10g01872 324 SUPERFAMILY Barwin-like endoglucanases 71 162 IPR036908 -
Viun10g01872 324 Gene3D - 209 323 IPR036908 -
Viun10g01872 324 CDD DPBB_kiwellin-like 196 323 - -
Viun10g01872 324 CDD DPBB_RlpA_EXP_N-like 90 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01872 Viun-Chr10 33540214 33567407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01872 - - gmx:100785431 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01872 10 33540214 33567407 Viun10g01872 10 33540214 33567407 ECH