Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01871 ATGGCTAAGAAAGAGACAAGAACAACAGAAGAGGATAGAATCAGTGACATGTCAGACGATGTTTTGTGTCACATTCTTTCTTTCCTTACAACAAAGGAAGCCATTGTTACATCGTTATTGTCAAAGCGATGGACTCTTCTATGGTGCATGCTTCCCTCTCTCCACGTTCACTGCTCCAAACCAATCATCCAACACCACGCTCATGTTCAAACCTTCTTGGCCTTACACAGAGCACCAAAGATCAAAACTTTTCATCTCCAATGTCACAGCCACGAAGTTTGTTGTTCACATCACACAGAAGAATGGGTCTCTGAAGTGGTGGCGAAGAAAGTTGAAAACCTGAATATCTCCTTATGCAACTCCCATGAATCGATGCTATCATTGCCTACCTTGTTCACTTGCTCCACACTTGTCACCTTGAACATCAATGGCCCCTTTTATCTCTCCATTCCTTCTTCTGTTCATCTCCCTAATCTCAAGACCATGGAGCTCCGTGTAAACTCATGCATCCCCCACTCTAATTTTTGCAAGCTCGTGTCTGAATCTGCGGCTCTTGAACTGTTTTACATGGGGCCAATGTTGTTAGGTAATTGCTTCCAAGAGGTGAAGGCTGTGCATAAGTGTGGACGTGTTGAAGTCTTCTACAGCAACTGGGTCTGCGACCTGTTCATAGAAAGTGAACGTGATTATGATTTTAATATCTCAGATGTTATGGCGCTGAGAACATGGCCAAACATTGTGAGAGTGAAGGCTTATGTGACAGTGCACTTTGATGATATAGATTTTGTCGAGAACATCCTCGAAGGGCTACGAAACGTTGAGTTTTTGTATATGAAATATTTTAGACTATGGTTGAAGCCTTCTCTTCATCTTCTACCGTTTAACAATTTAGTTGAGCTTCGTCTTCTTCTTAATAGAGAAGACTCCATGTTTGATGATTTTCCCAGAAAGTGCCCTAAGCTTAAAGTTCTTGAATTTAATATCATGGACAGTCCCCTTGATATCAGTGAACGATATCGATATCATGTTCATCACGGAGTCAGAGAACGCGACCTTTCCATTGTTCATTATCTTCCTCTAATGTCACCTTAG 1092 0.4176 MAKKETRTTEEDRISDMSDDVLCHILSFLTTKEAIVTSLLSKRWTLLWCMLPSLHVHCSKPIIQHHAHVQTFLALHRAPKIKTFHLQCHSHEVCCSHHTEEWVSEVVAKKVENLNISLCNSHESMLSLPTLFTCSTLVTLNINGPFYLSIPSSVHLPNLKTMELRVNSCIPHSNFCKLVSESAALELFYMGPMLLGNCFQEVKAVHKCGRVEVFYSNWVCDLFIESERDYDFNISDVMALRTWPNIVRVKAYVTVHFDDIDFVENILEGLRNVEFLYMKYFRLWLKPSLHLLPFNNLVELRLLLNREDSMFDDFPRKCPKLKVLEFNIMDSPLDISERYRYHVHHGVRERDLSIVHYLPLMSP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01871 363 SUPERFAMILY F-box domain 11 58 IPR036047 GO:0005515
Viun10g01871 363 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 12 327 - -
Viun10g01871 363 SUPERFAMILY RNI-like 103 325 - -
Viun10g01871 363 CDD F-box_AtFBL13-like 14 48 - -
Viun10g01871 363 Pfam F-box domain 14 44 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01871 Viun-Chr10 33532088 33533179 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01871 3 302 EF-hand Containing Proteins AT5G41840 29.330 6.16e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01871 - - vun:114165572 737.643