Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01860 ATGGAGAAGGACAACGAGGCATATCTGAAACTCTTCTGGGGGCGTTCGAGTAATCAGAAAATGAGTTTGTTGTCGAAGAAGGGGAAATCCAGAACAATGGTGTTTGTCATGGTTTTCTTTGCAGCCACTTTCCTTGCTTTCACTGTCTGGAACATTACTTCGACATTTTCTCCAGGTGCTTCCATTCTAATGAAGAAGAAACCCTCCCCCGTGCCAATACCGAAAGTCCAAGAACAAGAGTTCCCACTTAGGTGCACCCCACCACACGTGCCACAAGAGTGCCCTAGAGACTACCCTAGGTCGCATAAGCCCACGGGCCCAGCCCGCACGTGCCCCTCGTACTTCAAATGGATCCACGAGGACCTGAAGGCATGGAGAGAGAGAGGGATCACGAGGGAAATGGTGGAGGGGGCAAGGCGAACGGCACACATGAGGGTAGTGATCGTGGACGGGAGGGTGTACGTGGAGAAGTATAAGAAGTCGATCCAGACCAGAGATGCGTTCACTTTGTGGGGCATCATGCAACTGCTGAGGGTGTATCCCGGTAAAATTCCTGATCTGGAGCTCTTGTTTGATTGTGATGATAGGCCCGTTATACCGAAGGGAAGGTTTGAAGGCCCAAATGCTGCTACTCCACCGTTGTTTCGCTATTGCTCGGACCAGTGGAGCTTTGATATCGTCTTCCCTGATTGGTCCTTTTGGGGATGGGCTGAGATAAACATAAAGCCATGGAAATATGTGCTAGAAGATATAAAAAATGGGAACAAGAAAACCAAGTGGAAAGAAAGAGTGCCATATGCGTATTGGAAGGGTAACCCTAATGTGACTCCAACTAGGAAAAACCTTATGACATGCAATCTCACAGACAAAGATGACTGGAACACTCGCCTATACATACAGGACTGGGATCAAGAATCCCAACAAGGGTTCAAACAATCCAACTTAGGGGACCAATGCACACATAGGTATAAAATTTATGTAGAAGGTTGGGCTTGGTCTGTGAGTGAAAAGTATATTTTGGCATGCGATTCTACAAACTTGTATGTTAGGTCTCGCTTCCATGATTTTTTTATCCGAGGCATGGTGCCATTGGAGCACTATTGGCCCATTAGAGACAACACCAAGTGCTCTTCTCTTAAGTTTGCCGTCGAATGGGGCAACAATCACACCGACAAGGCACAGGCAATGGGGGAGGCTGCAAGCAAATTCATTCATGAGGACATGGACATGGATCATGTGTATGATTACATGTTTCATCTGCTAAATGAATATGCAAAGCTCCTGAAGTTCAAACCAGTTATACCTCCAAAAGCTGTGGAGTATTGTCCTGAAACAATGGCATGTGCTTTAAATGGTACAGAGAGAAGGTTCATGGAAGATTCAATGGTGAAGTTTCCTAGTCATTCAAATCCATGCACTATTCCTCCTCCATATGATGCTACAAGCCTACAACAATTTCTAGACAGAAAAGCTAATTCAACAAGACAGGTAGAAATTTGGGAAGATGAATATTGGGAGAGTAAAAAGAAGGTACAATAG 1539 0.4548 MEKDNEAYLKLFWGRSSNQKMSLLSKKGKSRTMVFVMVFFAATFLAFTVWNITSTFSPGASILMKKKPSPVPIPKVQEQEFPLRCTPPHVPQECPRDYPRSHKPTGPARTCPSYFKWIHEDLKAWRERGITREMVEGARRTAHMRVVIVDGRVYVEKYKKSIQTRDAFTLWGIMQLLRVYPGKIPDLELLFDCDDRPVIPKGRFEGPNAATPPLFRYCSDQWSFDIVFPDWSFWGWAEINIKPWKYVLEDIKNGNKKTKWKERVPYAYWKGNPNVTPTRKNLMTCNLTDKDDWNTRLYIQDWDQESQQGFKQSNLGDQCTHRYKIYVEGWAWSVSEKYILACDSTNLYVRSRFHDFFIRGMVPLEHYWPIRDNTKCSSLKFAVEWGNNHTDKAQAMGEAASKFIHEDMDMDHVYDYMFHLLNEYAKLLKFKPVIPPKAVEYCPETMACALNGTERRFMEDSMVKFPSHSNPCTIPPPYDATSLQQFLDRKANSTRQVEIWEDEYWESKKKVQ 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01860 512 Coils Coil 483 503 - -
Viun10g01860 512 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 63 506 - -
Viun10g01860 512 SMART cap10 183 431 IPR006598 -
Viun10g01860 512 Pfam Glycosyl transferase family 90 108 501 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01860 Viun-Chr10 33442459 33448366 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01860 - - gmx:100790123 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01860 10 33442459 33448366 Viun10g01860 10 33442459 33448366 ECH