Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01840 ATGTCTTCACGTTTGGTCTTTCTTTTTTTTCTTGTAGTCATTTCTACATCACATTCCAATGCATATCCTTTATCAACACAAAATAGATGGATCATAGATGAAGCCACGGGACAACGTGCCAAATTGGTGTGTGCTAATTGGGCTGGCCACCTTCAACCAATGATCCCCGAGGGTCTTGACAAGAGGCCATTGAAGGACATTGTTGGTGAGCTTGTGAAGCACAAGTTCAATTGCGTACGTCTCACTTATGCAATCTACATGTGGACACGCTATGCTCATGAGAATGTGAGTGCCAATTTAGCCTCTTTGGATGTACCAGAAGTGGTAGAAGGCATTGCTAAGAACAATCCTTCTGTGTTGTCCATGACACACATTCAGACCTTTCATGCGGTTGTTCACGAACTTGGAGTTCAGAATGTGAAAGTGTTGCTTGATAACCATGTGAGTGAGCCGATGTGGTGCTGTAATGATGACGATGAAAATGGCTTCTTCCATGATAGACATTTCAATCCTCAGGAATGGGTGCATGGTCTTACTTTGGCTGCCAAACACTTCAATGGAAACCCTGTTGTTGTGGCAATGAGTTTGAGGAATGAGTTGCATGGTCCTCGCCAAAATTTGAAGGATTGGTACAAGTACATGAGCCAAGGAGCACTAGCAATTCATGAGGCAAATCCAAATGTGCTTGTGCTTATCTCAGGTTTGAACTATGACACTGAGTTGCAATTCTTAAAGAAAAAGCCATTGAATATAGACTTGGGTAAAAAAATGGTGTTTGAGACACATTTGTACTCATGGTCTGGAATTGGAACCCTTAAATTGAGAGAGATATGGACAAAGCAACCATTGAATAGGATATGTGCTAACAATGTCAAAGCGATAGACCATAGAGCTGGATTCCTTACTATCGGAAAGAATGCAACTCCTTTGATTTTTACTGAGTTTGGATTCAACGAGGCAGGTTCTTCGGTGGAAGACAACCGATTCTTGACATGCCTTCAGACTTATCTTCTTGGAAATGATATGGACTGGGGATTTTGGGCTTTCCAAGGTACCTACTACCTAAAGAAAGATCAGGTCCAAGTCGAGGAGTCATTTGGTGTAATGGATGCAACATGGCATAACCTTAGATATCCTAACTTCACGGACAAGTTCCAACTTTTGCAAAGGAAGAATATTGAACCTAACTCCAAGGCTCCCATTGTAAATATCTTGTACCATCCACTGTCCGGTCAATGTGTTCAAGTGAATGACAAGAATGAAGTTGAACTTGGAAGATGTGAGACCAAAACTAGATGGGTTCGTGCAGAGAATGAAACTAAAATCATTTTACATGGCACTAAGAAGTGCTTAACCACAACTGGTGAAGGGCTTCCTGTTATAGTTTCGGATTGTGAAAGGAATAATAGTTCTTGGAGATCTGCATCTCTTTCTAAACTACACTTGGCAACTATGAATCAACAACAGGAACAACTTTGCTTACAAAAGGATTCTAACTCATCTACCATTGTGACGTCAAAGTGTATCTGCATAAAAGATGATTCTCTTTGTCTTGATGATCCTCAAAGCCAGTGGTTCCAACTTGTTCAAACCAATGTGTAG 1602 0.4101 MSSRLVFLFFLVVISTSHSNAYPLSTQNRWIIDEATGQRAKLVCANWAGHLQPMIPEGLDKRPLKDIVGELVKHKFNCVRLTYAIYMWTRYAHENVSANLASLDVPEVVEGIAKNNPSVLSMTHIQTFHAVVHELGVQNVKVLLDNHVSEPMWCCNDDDENGFFHDRHFNPQEWVHGLTLAAKHFNGNPVVVAMSLRNELHGPRQNLKDWYKYMSQGALAIHEANPNVLVLISGLNYDTELQFLKKKPLNIDLGKKMVFETHLYSWSGIGTLKLREIWTKQPLNRICANNVKAIDHRAGFLTIGKNATPLIFTEFGFNEAGSSVEDNRFLTCLQTYLLGNDMDWGFWAFQGTYYLKKDQVQVEESFGVMDATWHNLRYPNFTDKFQLLQRKNIEPNSKAPIVNILYHPLSGQCVQVNDKNEVELGRCETKTRWVRAENETKIILHGTKKCLTTTGEGLPVIVSDCERNNSSWRSASLSKLHLATMNQQQEQLCLQKDSNSSTIVTSKCICIKDDSLCLDDPQSQWFQLVQTNV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01840 533 Gene3D Glycosidases 21 390 - -
Viun10g01840 533 SUPERFAMILY Ricin B-like lectins 404 508 IPR035992 -
Viun10g01840 533 SUPERFAMILY (Trans)glycosidases 21 376 IPR017853 -
Viun10g01840 533 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 12 532 - -
Viun10g01840 533 Pfam Cellulase (glycosyl hydrolase family 5) 63 349 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01840 Viun-Chr10 33380623 33382528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01840 21 530 Glycoside Hydrolase AT1G13130 38.685 8.36e-136 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01840 K01179 - adu:110276660 572.392