Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01835 ATGGGAGAGGCAACAGAAAGGTATGCAGTTGTGACAGGTGCAAACAAAGGAATTGGATTAGAGATAGTTAAGCAGTTAGCTTCAAAAGGAATAAAGGTGGTGCTCACTGCAAGGAATGAAGAGAGGGGTCTTCAAGCATTGCAAACACTCAAAGCCTCAGGTCTTTCTCATCTTGTGCTGTTTCATCAGTTAGATGTTGCTGATGCTGCTAGTGTAGCTTCTCTCGCACATTTTATCAAATCCAAATTTGGTAAACTTGATATTCTGGTTAACAATGCAGGAATTAGCGGAATTGTAATCGAAGACAGTGATTTAATAAGTACACTAATCCTGAATCGTGGGGTGGTACCAGATGAGGAAGGAACAAAGACATTGACTCAAACATATGAGTTAGGTGAAGAATGCCTGCAAATAAATTACTATGGCACTAAAATAACTGTAGAATCACTCATGCCCCTCCTCCAATTATCCGATTCACCAACAATTGTGAATGTATCGTCCTTTCTTGGGCAGTTAGAGAGTTTCCCTAAGGAATCATGGGCAAGAGGAGTGTTGAGTGATGCTGATAACCTGACTGAAGAGAAAATAGATGAAATAGTGAAGAAGTTCCTGAGTGATTTCAAAGAAGGTTCATTAGAGAGTAAAGGGTGGCCAAGGTATCTAGGAGCCTATATTGTGTCGAAAGCTGCTATGAATGGGTACACAAGAATCCTTGCAAAGAAAAACCCATCATTGTGCATAAACAGTGTTTGTCCTGGTTATGTGAAGACAGATATAACATCAAACACTGGTTTTCTAACAGTGGAAGAAGGTGCTGCTAGTCCTGTCAGGCTTGCACTGCTTCCCAATGGTTCTCCATCTGGTCTCTTCTATTTCAGAACTGATGTGGCTTCCGCTCAACAGGTTACAAGAACTGACTTGAAAGTTGGATTGAAACTGAAGATGGGAGAGGCAACAGAAAGGTATGCAGTTGTGACAGGAGCAAACAAAGGAATTGGATTAGAGATAGTTAAGCAATTAGCCTCAGCAGGGATCAAGGTGGTGCTTACAGCAAGAAATGAAGAGAGGGGTCTGCATGCAATGGAAAAAATAAAAGCCTCAGCTCTGTCTCACCTTGTGATGTTTCATCAGCTGGATGTGGCTGATGCAACCAGTGTAGCTTCTCTCGCAGATTTTATCAAATCAAAGTTTGCAAAACTTGATATTCTGGTTAACAATGCAGGGATTGGTGGAGCAATAACCAAAGACGTTGATTTATTGCCTTCAGTTCTCCTCAACCCTGGGGCTGTATCAGAAGAAGATGGAGCAAAGGCAATGACTCAAACATATGAGTTAGCAGAAGAATGCTTGCAAATAAATTACTATGGCACTAAAATAACTGTAGAATCACTCATGCCCCTCCTCCAATTATCTCATTCACCAACAATTGTGAATGTGTCCTCCTCTAAGGGGAAATTACAGAACTTCCCTAAGGAATCATGGGCAAGAGGAGTGTTGAGTGATGCTGATAACCTCACAGAAGAGAAAATAGATGAAATAGTGAAGAAGTTTCTAAGTGATTTCAAAGAAGGTTCATTAGAGAGTAAAGGGTGGCCTAGGTATATGGGTGCCTATATTGTGTCAAAAGCTGCTATGAATGGATACACAAGAATCCTTGCAAAGAAAAACCCATCATTCTGCATAAACAGTGTTTGCCCTGGTTATGTGAAGACAGATATAACATCAAACACTGGTTTTCTAACAGTGGAAGAAGGTGCTGCTAGTCCTGTCAAGCTTGCACTGCTTCCCAATGGCTCTCCATCTGGTCTCTTCTATTACAGAGCTGATGTGGCTTCCTTTTTGAAACCAAAGATGGGAGAGGAAAAAGAAAGGTATGCAGTTGTGACAGGAGCAAACAAAGGAATCGGATTAGAGATAGTTAAGCAATTAGCCTCAGCAGGGATCAAGGTGGTACTCACAGCAAGAAATGAAGAGAGGGGTCTGCATGCAATGGAAAAAATAAAAGCCTCAGGTCTATCTCACCTTGTGATGTTTCATCTTCTGGATGTGGCTGATGCAACAAGTGTAGCTTCTCTCGCTGATTTTATCAAATCAAAGTTTGGAAAACTTGATATTCTGGTTAACAATGCAGGGATTATTGGAGCAGTAACCAAAGACATTGAATTATCGCGTTCAGTTCTCCTCAAGCCTGGGGCTGCAACAAAAGAAGAAGGAACAAAGGCAATGACTCAGACATACGAGTTAGCAGAAGAATGCTTGCAAATAAATTACTATGGCACTAAAATAACTGTAGAATCACTCATGCCCCTCCTCCAATTATCCGATTCACCAAGAATTGTGAATGTATCGTCCTCTGTGGGGCAATTAGAGAACATCCCTGAGGAATCATGGGCAAGAGGAGTGCTGAGTGATGCAGATAACCTCACAGAAGAGAAAGTGGATGAAATAGTGAAGAAATTTCTAAGTGATTTCAAAGAAGGTTCATTAGACAGTAAAGGGTGGCCTAGGTATAAGGGTGCCTATATTATGTCAAAAGCTGCTATAAATGGGTACACAAGAATCCTTGCAAAGAAAAACCCATCATTCTGCATAAACAGTGTTTGCCCTGGTTATGTAAAGACAGATCTAACATTCAACACTGGTTATCTAACAGTGGAAGAAGGTGCTGCTAGTCCTGTCAGGCTTGCACTGCTTCCTAATGGCTCCCCATCTGGTCTCTTCTATCACAGAGCTGATGTGGCTTCCTTTTGA 2751 0.414 MGEATERYAVVTGANKGIGLEIVKQLASKGIKVVLTARNEERGLQALQTLKASGLSHLVLFHQLDVADAASVASLAHFIKSKFGKLDILVNNAGISGIVIEDSDLISTLILNRGVVPDEEGTKTLTQTYELGEECLQINYYGTKITVESLMPLLQLSDSPTIVNVSSFLGQLESFPKESWARGVLSDADNLTEEKIDEIVKKFLSDFKEGSLESKGWPRYLGAYIVSKAAMNGYTRILAKKNPSLCINSVCPGYVKTDITSNTGFLTVEEGAASPVRLALLPNGSPSGLFYFRTDVASAQQVTRTDLKVGLKLKMGEATERYAVVTGANKGIGLEIVKQLASAGIKVVLTARNEERGLHAMEKIKASALSHLVMFHQLDVADATSVASLADFIKSKFAKLDILVNNAGIGGAITKDVDLLPSVLLNPGAVSEEDGAKAMTQTYELAEECLQINYYGTKITVESLMPLLQLSHSPTIVNVSSSKGKLQNFPKESWARGVLSDADNLTEEKIDEIVKKFLSDFKEGSLESKGWPRYMGAYIVSKAAMNGYTRILAKKNPSFCINSVCPGYVKTDITSNTGFLTVEEGAASPVKLALLPNGSPSGLFYYRADVASFLKPKMGEEKERYAVVTGANKGIGLEIVKQLASAGIKVVLTARNEERGLHAMEKIKASGLSHLVMFHLLDVADATSVASLADFIKSKFGKLDILVNNAGIIGAVTKDIELSRSVLLKPGAATKEEGTKAMTQTYELAEECLQINYYGTKITVESLMPLLQLSDSPRIVNVSSSVGQLENIPEESWARGVLSDADNLTEEKVDEIVKKFLSDFKEGSLDSKGWPRYKGAYIMSKAAINGYTRILAKKNPSFCINSVCPGYVKTDLTFNTGYLTVEEGAASPVRLALLPNGSPSGLFYHRADVASF 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01835 916 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 777 785 IPR002347 -
Viun10g01835 916 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 701 712 IPR002347 -
Viun10g01835 916 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 841 860 IPR002347 -
Viun10g01835 916 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 321 599 IPR036291 -
Viun10g01835 916 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 624 902 IPR036291 -
Viun10g01835 916 FunFam (+)-neomenthol dehydrogenase 619 916 - -
Viun10g01835 916 CDD carb_red_PTCR-like_SDR_c 624 913 IPR045313 GO:0016616
Viun10g01835 916 PRINTS Glucose/ribitol dehydrogenase family signature 224 243 IPR002347 -
Viun10g01835 916 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
Viun10g01835 916 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Viun10g01835 916 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Viun10g01835 916 Pfam short chain dehydrogenase 322 487 IPR002347 -
Viun10g01835 916 Pfam short chain dehydrogenase 8 173 IPR002347 -
Viun10g01835 916 Pfam short chain dehydrogenase 625 790 IPR002347 -
Viun10g01835 916 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 285 IPR036291 -
Viun10g01835 916 CDD carb_red_PTCR-like_SDR_c 321 610 IPR045313 GO:0016616
Viun10g01835 916 FunFam (+)-neomenthol dehydrogenase 2 299 - -
Viun10g01835 916 FunFam (+)-neomenthol dehydrogenase 316 613 - -
Viun10g01835 916 CDD carb_red_PTCR-like_SDR_c 7 296 IPR045313 GO:0016616
Viun10g01835 916 Gene3D - 313 613 - -
Viun10g01835 916 Gene3D - 3 299 - -
Viun10g01835 916 Gene3D - 618 916 - -
Viun10g01835 916 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 321 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01835 Viun-Chr10 33338848 33358543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01835 627 881 Acyl Lipid Metabolism Gene Families AT1G24360 24.031 6.49e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01835 - K15095 sind:105174340 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01835 10 33338848 33358543 Viun10g01835 10 33338848 33358543 ECH