Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun10g01797 | ATGGCCACCAAATCAACAACTCTCCAGCTCACGCTTCTCTCGGCGGAAGGTCTACACGTCAGGGGAAAACCGGCTAACACCAACGTCTTCGCGGTGGTTCGCGCCGACTCCATTGCCAGCCACACGACGGCGACGGCCACGGAGACCAACGGCGAGCTGTCATGGGAGGAGACGTTCTCCTTGGAGGTGGGGCCGCACGCCAGGTGCCTCACCATTGAAGTGAAGTTCAGGACGGGAGCCGGAGAGAGAGACATCGGCGTCGCAAGAATCGCGCTTTCAGATTTTCTCGGAAGGTCGGTGCCCGGCAATAGTTTGAAGTTGTGCTACAGGTTGAGGGACTGGGATGGGAGAGAAAACGGGATCGTTAATTTCTCCGTTGGAGTGGCGGCGCCGCCGCAGCCTAACGCCGCCGCCGATGAGAATGGTTGTGAGTCGTCGTTGGGTGGAGTTGTTACCGGCATTAACGTTTGA | 471 | 0.586 | MATKSTTLQLTLLSAEGLHVRGKPANTNVFAVVRADSIASHTTATATETNGELSWEETFSLEVGPHARCLTIEVKFRTGAGERDIGVARIALSDFLGRSVPGNSLKLCYRLRDWDGRENGIVNFSVGVAAPPQPNAAADENGCESSLGGVVTGINV | 156 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun10g01797 | 156 | Gene3D | C2 domain | 2 | 124 | IPR035892 | - | |
| Viun10g01797 | 156 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Viun10g01797 | 156 | PANTHER | INGRESSION PROTEIN FIC1 | 7 | 131 | - | - | |
| Viun10g01797 | 156 | SMART | C2_3c | 7 | 104 | IPR000008 | - | |
| Viun10g01797 | 156 | Pfam | C2 domain | 7 | 100 | IPR000008 | - | |
| Viun10g01797 | 156 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 7 | 126 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun10g01797 | Viun-Chr10 | 33025050 | 33025884 | Dispersed/Proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun10g01797 | - | - | vra:106773894 | 244.588 |