Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun10g01793 | ATGGAAGCAAAACAGCAAAAACTCACCTTGGAGATCACAGTTATGTCGGGAGAAAACATAAGTGTGGATCGAAATTCAGTTTCCGATGAGGTCTATGTTGTTGTTCGTGCAGAGTCTTTGAAGTGTTGCACGACCCAAATGAAGAATGGAGATGATGGAGTGCATGCATGGAATGAGAAATTGTTGTTGGAGGTTCCTTCCTATGCAAGGTCTGTGACGTTTGAGGTTCAATGCAAGAAATACAAAGGATTTCGTCCTGTTGGTGTAGCAAGGATTGCTCTTTCGGATTTACTTCTTGCCAAAAACAACAATGTTTTATCCGAAAGTGTGTCTCAGATGTTTTGTTACGGTTTGAGGAGCTGGGAGGGTCGACGTAACGGGGTTCTTCATTTCGCAGTAAAGGTAGTTGATAATTTATCTGCACAAGCTAAACCAGAGAAAGACATAGAAATGGTGAGCTGTAGAGGATTTGAGAATGAAGTTACAGGGTTTCATGTAAACCCTAAAAATTCAAGTCATGGTATCACTGCCATTCCAGTTAAGGTGCACTAA | 552 | 0.413 | MEAKQQKLTLEITVMSGENISVDRNSVSDEVYVVVRAESLKCCTTQMKNGDDGVHAWNEKLLLEVPSYARSVTFEVQCKKYKGFRPVGVARIALSDLLLAKNNNVLSESVSQMFCYGLRSWEGRRNGVLHFAVKVVDNLSAQAKPEKDIEMVSCRGFENEVTGFHVNPKNSSHGITAIPVKVH | 183 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun10g01793 | 183 | Gene3D | C2 domain | 3 | 156 | IPR035892 | - | |
| Viun10g01793 | 183 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Viun10g01793 | 183 | PANTHER | INGRESSION PROTEIN FIC1 | 9 | 143 | - | - | |
| Viun10g01793 | 183 | SMART | C2_3c | 9 | 106 | IPR000008 | - | |
| Viun10g01793 | 183 | Pfam | C2 domain | 9 | 100 | IPR000008 | - | |
| Viun10g01793 | 183 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 9 | 139 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun10g01793 | Viun-Chr10 | 32994126 | 32994972 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun10g01793 | - | - | gmx:100810274 | 240.35 |