Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01792 ATGACAGTGAGATCACGTACGCTAGAAATCACCGTTATCTCCGGCGAAAACGTGCGCGTAAAGGAGGACGCATACGTCGTCGTTCGGGCGGAGTCGTTGAACTGCTGCACCACCAGAACGGCCAAAGACGACGGCACCAACTTCCTCTCGTGGAACGAGAAGTTCCTGTTGGAAGTCCCGGTGCATGCAAGATCGATCACATTCGAGGTCCAATGCAGCAAATTCAAGGGTTTTCGCCCACTTGGGGTCGCCAGAATCGCTGCCTCCGACTTCCTCGGCGGCGGCGCCGTCCCGGAAAATCAGTTGCAACAGTTGAGTTACGGGTTGAGGGACTGGGAAGGGAAGAGAAACGGGGTCATTCACTTCGCCGTCAGAGTGGCACCTCCGGCGCCACCGGTGGAGGAATGTCTGAAGCCCGCCGTGGGACAGGCGGTGACCGGAATGGGTTGCGGTGATCGTGATCGAATCAAGGTCGGTGGCAAGAGCAAGGGAGTTGTCGTTGGTGTGCCACTTTGGTGGAACCACCCAAACGTTGTTTAG 540 0.5722 MTVRSRTLEITVISGENVRVKEDAYVVVRAESLNCCTTRTAKDDGTNFLSWNEKFLLEVPVHARSITFEVQCSKFKGFRPLGVARIAASDFLGGGAVPENQLQQLSYGLRDWEGKRNGVIHFAVRVAPPAPPVEECLKPAVGQAVTGMGCGDRDRIKVGGKSKGVVVGVPLWWNHPNVV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01792 179 Gene3D C2 domain 3 140 IPR035892 -
Viun10g01792 179 PANTHER INGRESSION PROTEIN FIC1 6 139 - -
Viun10g01792 179 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 136 IPR035892 -
Viun10g01792 179 CDD C2_SRC2_like 7 122 IPR044750 GO:0006952
Viun10g01792 179 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Viun10g01792 179 Pfam C2 domain 7 92 IPR000008 -
Viun10g01792 179 SMART C2_3c 7 100 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01792 Viun-Chr10 32969081 32969872 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01792 - - gmx:100810797 264.233