Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01734 ATGGCTTCAGACCCCACCAGAAAGAGACTGGTATTAAGCTCAAAGGCCATGGCTGATGCAGCTTCATGGTACTGTGCCTTTGTTCTTGTGGCCCTTTTGCTCCTAACCATGTTCAGAGACAGCTCCACGCTTCCGAGCCATGTAGACAACAACAACAACAACCAACTCATGTCACGGCCATGCGAGGAAATCTATGTTGTTGGAGAAGGTGAGACACTTCACACGATAAGTGACAAGTGTGGTGACCCTTTCATAGTTGAGAACAACCCTCACATCCATGACCCTGATGATGTCTTCCCTGGCCTCGTTATCAAGATTACACCCTCACATCATGCCTAG 339 0.4838 MASDPTRKRLVLSSKAMADAASWYCAFVLVALLLLTMFRDSSTLPSHVDNNNNNQLMSRPCEEIYVVGEGETLHTISDKCGDPFIVENNPHIHDPDDVFPGLVIKITPSHHA 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01734 112 CDD LysM 64 106 IPR018392 -
Viun10g01734 112 Gene3D LysM domain 53 112 IPR036779 -
Viun10g01734 112 PANTHER EMBRYO SAC 1 13 111 - -
Viun10g01734 112 Pfam LysM domain 65 106 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01734 Viun-Chr10 32503382 32504203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01734 - - gmx:100815990 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01734 10 32503382 32504203 Viun10g01734 10 32503382 32504203 ECH