Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01724 ATGAGTATTATTACCTTGTTGATTTTTTTGCTACCCTTTTGCCTCTTAAACTTGAGCACCAACAACATTTTTGTAACTGGTCATTGTCTTGGCCATCAACAATCTTTGTTGCTGCATTTGAGGAACAACCTCATATTCAATCCAACAAAGTCCAAAAAACTGATTCACTGGAACCAAAGTGATGATTGTTGTGAATGGACTGGAGTGACATGCAACAAAGGCCATGTTATAGGTCTTGACTTGAGCCAAGAATCCATCTCTAGAGGTACTGATCATTTAAGCAGTCTCTTCAAGTTGCAATATTTGCAGAGTTTGAATTTGGCCCACAATGATTTTCATTCTGAGATTCCTCCAGAGTTCAAAAAGCTAAAGAGTTTGAGGCATTTGAATCTGTCAAATGCTGGATTTGAGGGGCAAATTCCAATTGAGATTTCTTTCCTGACCAAGTTAGAAACTCTTGATTTGTCTAACACAGTTACTTCAAAACATGGTTTGAATGGAGTCTTTCCAGAAAATATCTTCCAAATACCATCATTGCAGGTGCTTGATGTGTCTTATAATCCAAGTCTTCATGGCTCTCTACCAAACTTTCCAAGTCAAAGCTCTCTCTACAACTTCAACCTTAGCCACACAAATTTTTCTGGGCCTCTGCCAGAATCTATTGACAATTTGAAGCAATTGTCTAAATTAGACCTATCAAATTGCCAGTTCAGAGGAACACTTCCTTATTCAATGTCAAATCTCACCCAACTTGTTCATCTAGACCTATCATACAATAACTTTACTGGTCCTATTCCATCTTTTAGTAAATCCAAGGCCATGGTAGTTTTATCCCTTAATCATAATCATTTTACAGGTACAGTTCCATCTACTCATTTTGAAGGCCTTACAAATCTGATAAGCATTGATTTAGGAGATAACTCCTTTGATGGAAGAGTCCCTTCATCTTTATCAAGACTTCAATCTCTTCAACATCTCATGCTTTATTACAACAAATTTGATGGTGTGTTGGATGAATTTCCAAATGCTTCTGTGTCATCATTAGAGATGCTTGATTTGAGTGGCAACAACTTTGAAGGGCCTATTCCTATGTCTGTCTTTCAACTCAAAAGACTTCGTTTGCTTTATCTTTCCAAAAATAAGTTCAATGGCACTTTACAACTTGGTGCGATTGGGAGGCTGCAGAATCTGTCTTCACTTGATCTTGCACACAATAACTTGTCAGTTGATGCAAGAATTGATGATGCATCAACATTTCCCAGTTTGAAAACTCTCTGGTTAGGTTCATGCAATTTGAGAGCATTCCCTGAATTTTTGAGAAACAAATCTTCACTGCTCTACCTAGACTTGTCTAGCAATCACATTGAAGGAACAATACCAAACTGGATTTGGAAATTTGACAGTATGGTTATTTTGAATGTTTCTTACAACTTTCTGACAGATTTTGAAGGGCCTTTCCAAAACCTTACTTCAAATTTGTTCAAACTTGACCTTCACTCAAACAGTCTCCAAGGGCCTGCTCCTACTTTTCTGAAAAATGCCATTTATTTGGACTACTCAAGCAATAACTTCAGCTCTATTAACTTTGTCGACATTGCTAATCACATTCCTTTCTTGTACTTTCTCTCCCTCTCAAACAACAGTTTTCATGGAAAAATTCATGAATCCTTTTGTAACATTTCAGATCTTCGAGCACTTGATCTTTCTCATAACAGATTCAAAGGCCTCATTCCAATGTGTTTGACAGGAAGTAGCAAACTCAGGCTACTAAATCTTGGTGGAAATAAACTCGATGGTTACATTTCGGATACATTCTCAACTTCATGTTCTCTAAGGTTTTTGGATCTTAGTGGGAATCTTCTAAGGGGAACCATCCCAAAATCTCTAGCTAATTGCCAAAAACTACAAGTTCTAAACCTTGGAAACAATCAACTAACTGACAGATTTCCATGCTTCTTGAAGAGCATCTCCTCCCTCAGAGTCATGATTTTAAGGTCAAACAAATTGCATGGGAGTATTGGATGTTCCAATAACATTGGCAATTGGGAAACACTTCAAATTGTTGATTTAGCCTCCAACAATTTCAGTGGCACATTACCATCATCACTCTTACTGAGTTGGAAAACTCTGATGCTTGATGAAGATAAGGGTGGACGATTTGGCCATCTATACTTCAATCTCTATGATGACTTTAATCCTGTGAATTTCATAACTGCAATTGTAGATCTCAGTAGTGAGCTACAAATAGAGTTAGCAAAAGTTATAGCATCAGAGCCAACCCTTATAATAGACCACATAATCTCTCATGTATTTGAGGAAGGTGTTGGTGTGAGAACATACGAGGATTCGGTTACAATTGTGAACAAAGGTAGACAGTTAAATTTGGTTAAAATCCTCACTGCCTTCACTTCCTTGGATTTCTCATCAAACAGTTTGGAAGGGCCAATACCAGAAGAGCTTATGAATCTCACTGCACTGCATGCTCTTAACTTGTCACAGAACACTTTCTCAGGTAGCATCCCTTCTTCCTTAGGCAATCTGAAGCACCTTGAGTCCTTGGACTTGTCAGAAAACTCTTTGAGTGGAGAGATTCCAACAGAGCTTGCAGAGTTATCATTTCTTGCTGTCATGAATCTTTCTTACAACCATTTGGTGGGCAAAATACCCACAGGCACACAAATTCAGACATTTGAGGGTGATTCTTTTGTGGGCAATGAAGGGTTATGTGGACCTCCACTAACCCAGAACTGTGATGGTGGAAGGAAAAAGCTTTCACCACCAGCATCTGAAACGCCTGATTCTGATACAAAGGGTTCAATTGAATGGAATATCTTGAGTGTGGAATTGGGGTTTACTTTTGGCTTTGGAATTTACATATTCCCACTCATTTTCTTGAAGAGATGGAGAATGTGGTATTCCAACCATGTGGAAAACATCCTCTGCAAGATTGTTCCTCAGCTTGATTTTGTTTATGTGCATCGTGTGGGACAAAATTATAGAATCATGAGGTGGAACCCCTACTGA 3024 0.3829 MSIITLLIFLLPFCLLNLSTNNIFVTGHCLGHQQSLLLHLRNNLIFNPTKSKKLIHWNQSDDCCEWTGVTCNKGHVIGLDLSQESISRGTDHLSSLFKLQYLQSLNLAHNDFHSEIPPEFKKLKSLRHLNLSNAGFEGQIPIEISFLTKLETLDLSNTVTSKHGLNGVFPENIFQIPSLQVLDVSYNPSLHGSLPNFPSQSSLYNFNLSHTNFSGPLPESIDNLKQLSKLDLSNCQFRGTLPYSMSNLTQLVHLDLSYNNFTGPIPSFSKSKAMVVLSLNHNHFTGTVPSTHFEGLTNLISIDLGDNSFDGRVPSSLSRLQSLQHLMLYYNKFDGVLDEFPNASVSSLEMLDLSGNNFEGPIPMSVFQLKRLRLLYLSKNKFNGTLQLGAIGRLQNLSSLDLAHNNLSVDARIDDASTFPSLKTLWLGSCNLRAFPEFLRNKSSLLYLDLSSNHIEGTIPNWIWKFDSMVILNVSYNFLTDFEGPFQNLTSNLFKLDLHSNSLQGPAPTFLKNAIYLDYSSNNFSSINFVDIANHIPFLYFLSLSNNSFHGKIHESFCNISDLRALDLSHNRFKGLIPMCLTGSSKLRLLNLGGNKLDGYISDTFSTSCSLRFLDLSGNLLRGTIPKSLANCQKLQVLNLGNNQLTDRFPCFLKSISSLRVMILRSNKLHGSIGCSNNIGNWETLQIVDLASNNFSGTLPSSLLLSWKTLMLDEDKGGRFGHLYFNLYDDFNPVNFITAIVDLSSELQIELAKVIASEPTLIIDHIISHVFEEGVGVRTYEDSVTIVNKGRQLNLVKILTAFTSLDFSSNSLEGPIPEELMNLTALHALNLSQNTFSGSIPSSLGNLKHLESLDLSENSLSGEIPTELAELSFLAVMNLSYNHLVGKIPTGTQIQTFEGDSFVGNEGLCGPPLTQNCDGGRKKLSPPASETPDSDTKGSIEWNILSVELGFTFGFGIYIFPLIFLKRWRMWYSNHVENILCKIVPQLDFVYVHRVGQNYRIMRWNPY 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01724 1007 MobiDBLite consensus disorder prediction 916 936 - -
Viun10g01724 1007 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Viun10g01724 1007 SUPERFAMILY L domain-like 163 459 - -
Viun10g01724 1007 Gene3D Ribonuclease Inhibitor 271 512 IPR032675 -
Viun10g01724 1007 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 267 512 - -
Viun10g01724 1007 Gene3D Ribonuclease Inhibitor 513 924 IPR032675 -
Viun10g01724 1007 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 257 918 IPR046956 -
Viun10g01724 1007 Pfam Leucine Rich repeat 442 457 IPR001611 GO:0005515
Viun10g01724 1007 Pfam Leucine Rich repeat 631 647 IPR001611 GO:0005515
Viun10g01724 1007 SMART LRR_typ_2 248 270 IPR003591 -
Viun10g01724 1007 SMART LRR_typ_2 99 122 IPR003591 -
Viun10g01724 1007 SMART LRR_typ_2 394 416 IPR003591 -
Viun10g01724 1007 SMART LRR_typ_2 419 442 IPR003591 -
Viun10g01724 1007 SMART LRR_typ_2 345 369 IPR003591 -
Viun10g01724 1007 SMART LRR_typ_2 847 875 IPR003591 -
Viun10g01724 1007 SMART LRR_typ_2 320 342 IPR003591 -
Viun10g01724 1007 SMART LRR_typ_2 560 583 IPR003591 -
Viun10g01724 1007 SUPERFAMILY L domain-like 63 219 - -
Viun10g01724 1007 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 93 194 - -
Viun10g01724 1007 PRINTS Leucine-rich repeat signature 563 576 - -
Viun10g01724 1007 PRINTS Leucine-rich repeat signature 847 860 - -
Viun10g01724 1007 FunFam Tyrosine-sulfated glycopeptide receptor 1 737 922 - -
Viun10g01724 1007 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 513 716 - -
Viun10g01724 1007 Gene3D Ribonuclease Inhibitor 28 198 IPR032675 -
Viun10g01724 1007 SUPERFAMILY L domain-like 512 913 - -
Viun10g01724 1007 Pfam Leucine rich repeat 539 597 IPR001611 GO:0005515
Viun10g01724 1007 Pfam Leucine rich repeat 276 332 IPR001611 GO:0005515
Viun10g01724 1007 Pfam Leucine rich repeat 347 407 IPR001611 GO:0005515
Viun10g01724 1007 Gene3D Ribonuclease Inhibitor 199 270 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01724 Viun-Chr10 32406314 32409337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01724 29 970 Receptor kinase-like Gene Family AT1G47890 34.479 3.32e-131 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01724 - - gmx:100805833 1462.97