Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01712 ATGACGCCGAGGAGAGGGTTTTCCTTCGCCAAGAGCAGGGGCAAGGGCTCCTGCTTCCCCGTTCTCGGTTTCATTCTCCTCTGCGTTCTTGCGCCCGTGGTTTTCTTCCTCGCTCGGGGACTCTACGCTGCTGATCTAGATTATATTGCGGATGTTCCACGTAAACAGGTTAGCAAATGGAGAGAATGGCAGGCGTTACAGGATCTTAAATCACTTCTTTCAGAAGAGGTCCTTAATGTTATTGTATCCAGCACGAATGATTTGGGACCTTTCAGTCTTGACAATTTCAGAAAGAATTTGTCTGCTTCATGGAGAGTTGTTGGATTAGAAACTACAAACAGTACACATGAGGTTTGGAAGAACAATCTAAAGCAACCAACACATGTTAGACAAGAAAAGCCAAAGATGAAGGATGGAAGGTCTTCAGATGGTCTTCCTCTGTGGACTGATAGTCCTGCACGTGAAACCAGAAGGCATTTAATAGAGAGGAGGCGGGAAAAGCGTGCTGCTGAGTTGGTAAAAGAGGATAATGTAGTAACCGTAAAACTTGAAAACGCAGCTATTGAACGCTCAAAATCTGTTGAGTCAGCTGTTCTGGGGAAATACAGCATTTGGAGGAAAGAAATTGAGAATGAAAATGGTGATTCTACCGTTCGGTTGATGCGAGACCAGATCATTATGGCAAAGGTATATTTAAGCATTGCAAAGATGAAGAACAAGGTCGAACTTTATCAAGAACTAATTTTCCGGCTCAAAGAGAGTCAACGTGCGTTAGGTGACACAGTTTCTGATGCGGATCTACATCACAGTGCACATGGGAAAATAAAGGCTATGGGTCAAATTTTGTCAAAAGCAAGGGAGCTATTGTATGACTGCAAATTGGTCACTGGAAAATTAAGAGCAATGCTACAGACAGCTGATGATCAAGTTAGAAGTTTGAAGAAACAGAGCACATTTCTCAGTCAGTTGGCTGCTAAGACCATACCAAACGGAATCCATTGCTTATCCATGCGCCTTACCATAGATTACTACCTCCTTCCTCCTGAAAAGAAAATGTTCCCTCAAAGTGAGAATTTGGAGAATCCCAGTCTTTATCACTATGCTCTGTTTTCAGACAATGTCTTGGCTGCCTCTGTTGTTGTCAACTCAACTATTACGAATGCAAAGGATCCTTCAAAGCATGTTTTTCACATTGTTACTGATAAACTAAATTTTGGTGCCATGAACATGTGGTTTCTATTGAACCCTCCTGGAAAAGCTACAATCCATGTTGAAAATGTTGATGAGTTTAAGTGGTTGAACTCGTCCTACTGCCCAGTCTTGCGGCAGCTCGAATCTTCTACAATGAAAGAGTATTATTTCAAAGCAGGCCATCCAAACACACTTTCTTTCGGTGCTTCCAATCTTAAGTATAGGAATCCAAAATATCTCTCAATGCTCAACCATCTGAGATTCTATCTTCCTCAGGTTTATCCAAAATTGGATAAAATTTTATTTCTTGATGATGACATTGTTGTTCAGAAGGATTTGACTGGACTATGGGATGTGGATCTTAATGGGAAAGTAAATGGTGCTGTTGAAACGTGTGGTCAGAGCTTTCACAGATTTGACAAATACCTTAACTTCTCAAATCCGCATATTGCAAGAAATTTTGATCCAAATGCCTGTGGTTGGGCATACGGGATGAACATATTTGATCTGAAGGAGTGGAAAAAGAAGGACATCACCGGTATATATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGGACATTACCTCCAGGACTAATAACGTTCTATGGGTTGACACATCCGCTAGATAAATCATGGCATGTACTTGGTTTGGGTTATAATCCAAGTGTGGATCGATCAGAGATTGATAATGCAGCAGTTGTACACTACAATGGTAATATGAAGCCGTGGTTAGAAATTGCCATGACAAAGTATCGGTCTTACTGGATCAAATATGTCAAGTACAGTCATCCCTATCTTCGGACCTGTAAGCTAAATGAATAA 2031 0.4136 MTPRRGFSFAKSRGKGSCFPVLGFILLCVLAPVVFFLARGLYAADLDYIADVPRKQVSKWREWQALQDLKSLLSEEVLNVIVSSTNDLGPFSLDNFRKNLSASWRVVGLETTNSTHEVWKNNLKQPTHVRQEKPKMKDGRSSDGLPLWTDSPARETRRHLIERRREKRAAELVKEDNVVTVKLENAAIERSKSVESAVLGKYSIWRKEIENENGDSTVRLMRDQIIMAKVYLSIAKMKNKVELYQELIFRLKESQRALGDTVSDADLHHSAHGKIKAMGQILSKARELLYDCKLVTGKLRAMLQTADDQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKKMFPQSENLENPSLYHYALFSDNVLAASVVVNSTITNAKDPSKHVFHIVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESSTMKEYYFKAGHPNTLSFGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWDVDLNGKVNGAVETCGQSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLITFYGLTHPLDKSWHVLGLGYNPSVDRSEIDNAAVVHYNGNMKPWLEIAMTKYRSYWIKYVKYSHPYLRTCKLNE 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01712 676 SUPERFAMILY Nucleotide-diphospho-sugar transferases 365 673 IPR029044 -
Viun10g01712 676 MobiDBLite consensus disorder prediction 127 149 - -
Viun10g01712 676 Pfam Glycosyl transferase family 8 334 650 IPR002495 GO:0016757
Viun10g01712 676 CDD GT8_like_1 365 663 - -
Viun10g01712 676 Coils Coil 234 254 - -
Viun10g01712 676 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 173 674 IPR029993 GO:0047262
Viun10g01712 676 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 367 670 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01712 Viun-Chr10 32243329 32253196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01712 1 676 Glycosyltransferase AT3G61130 70.845 0.0 1000
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01712 K13648 - gmx:100811181 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01712 10 32243329 32253196 Viun10g01712 10 32243329 32253196 ECH