Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01710 ATGTTGATCCCTCATTCATCAGTGCTGGTTGCACCCCAAACCACCACCCCCATCCACTTGGATGCACCTCTCCTTAACCATTCCAACATACCCTCTGAGTTTGTGTGGCCTGACAATGAGAAACCATGCCTTCAGCCACCATCACTCAAGATCCCACCCATTGACATGAAAAGCTTCCTCTCAAGAGATCCACAGGCTGTGGAAGCCATTTGTGCAGAGGTGAGTGAGGCATGCAAGAAGCATGGCTTCTTCCTTGTTGTCAACCATGGTGTTGATAAGAAGCTCCTAGAGAGAGCTCACAAGCTCATAGACACTTTCTTCTGCATGGAACTCCCAGAGAAGCAGCAGCTTCAGAGAAAGCTGGGAGAACACTGTGGCTATGCTAATAGCTTCATTGGGAGATTCTCCTCCAAACTCCCCTGGAAGGAAACACTCTCTTTCCATTACTCTAATGATAAATCCACCAGAACTGTTGAGGACTATTTTCTAACTTCCATGGGTGAAGATTACAGAGAGTTTGGGAGTATGTTTCAAGAGTACTGTGAGGTGATGAGCAAGCTGTCTCTCGAGATCATGGAGCTTCTGGGAATGAGTCTGGGAGTAAGCAGAGAATGTTTCAGAGATTTCTTCGAAGACAATGAGTCTGTTATGAGGTTGAACTACTACCCACCATGCCTAAAACCAGAGCTAGCTTTAGGAACTGGGCCTCATTGCGACCCCACTTCCCTAACCGTTCTCCACCAAGATCAAGTCGAGGGCCTCCAAGTCTTTGTCGATGGAAGATGGTACTCTGTCGCCCCAAAAGAAGATGCGTTCGTTGTCAACATTGGCGACACATTTATGGCTCTTTCCAATGGGATATTCAAGAGTTGCTTGCATAGAGCTGTTGTGAACAACCAGGTTGTGAGAAAATCTCTGGCTTTCTTCCTTTGTCCGAATAAAGACAAAGTGGTGAGTACTCCGAAGGAACTAGTTACCGCCGAGAATCCAAAGAAATATCCAGACTTCACATGGCGAACTCTTCTTGAATTCACACAGAAACATTACAGGTCTGACGAGGAAACACTTGATGCCTTCTCGAAATGGTTGCTGGAGGAAAACAAGTGA 1107 0.4634 MLIPHSSVLVAPQTTTPIHLDAPLLNHSNIPSEFVWPDNEKPCLQPPSLKIPPIDMKSFLSRDPQAVEAICAEVSEACKKHGFFLVVNHGVDKKLLERAHKLIDTFFCMELPEKQQLQRKLGEHCGYANSFIGRFSSKLPWKETLSFHYSNDKSTRTVEDYFLTSMGEDYREFGSMFQEYCEVMSKLSLEIMELLGMSLGVSRECFRDFFEDNESVMRLNYYPPCLKPELALGTGPHCDPTSLTVLHQDQVEGLQVFVDGRWYSVAPKEDAFVVNIGDTFMALSNGIFKSCLHRAVVNNQVVRKSLAFFLCPNKDKVVSTPKELVTAENPKKYPDFTWRTLLEFTQKHYRSDEETLDAFSKWLLEENK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01710 368 Pfam non-haem dioxygenase in morphine synthesis N-terminal 51 154 IPR026992 -
Viun10g01710 368 FunFam Gibberellin 20 oxidase 2 22 350 - -
Viun10g01710 368 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 51 341 - -
Viun10g01710 368 Pfam 2OG-Fe(II) oxygenase superfamily 214 312 IPR044861 -
Viun10g01710 368 Gene3D - 24 351 IPR027443 -
Viun10g01710 368 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 212 312 IPR005123 -
Viun10g01710 368 SUPERFAMILY Clavaminate synthase-like 24 352 - -
Viun10g01710 368 PRINTS Isopenicillin N synthase signature 74 91 - -
Viun10g01710 368 PRINTS Isopenicillin N synthase signature 237 258 - -
Viun10g01710 368 PRINTS Isopenicillin N synthase signature 272 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01710 Viun-Chr10 32192652 32194603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01710 49 350 Glycosyltransferase AT5G59530 32.686 6.20e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01710 K05282 - gmx:100775693 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01710 10 32192652 32194603 Viun10g01710 10 32192652 32194603 ECH