Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01708 ATGCACTCACTCCCACACCACACTTCACAACCACCATCAATGGAAGACCAAAACCAGTGTAAAACAAGTGACCAACAATTGCAAAACCTTAATCTCCCCAAAGTTCTTCTTCACGGTCCCCCAGGTTTTTCCTCTGTTCTCCAACCACCCTATTCCGAAAAGTTCCATCTTTTAAACCACTCATCGCTTCCCCTTCACCAATTTGCGGCCACCCACCCCCACCACTGCGCCACCGTGGCTGCCGTCCTCTGTGATGGGGGCTACCCCCTCACCGTCGACATGCTTAGTCTCCTCCCGTCGCTCCGCCTCGTTGTCACCGCCAGTGCAGGCACTGATCACGTCGACCTGGACGAGTGCCGCCGCCGCGGAATTCAGGTTGCCGGTGCCGGAAATTTGTTTTCCGAGGACGTCGCCGATTTGGCGGTGGCTTTGTTGATCGACGTGGTGATGAAGATATCAGCAGCGGATCGGAGTTTGAGAAAACGACACGTTGATTCACGAGCTATTACGTATGCTTCCAAGGTAACAGGAAAGAGAGTTGGAATAGTAGGTTTGGGAAGAATAGGGTTGGAAGTGGCACATAGGCTTGAGGCCTTAAATTGCAAGGTATCATACAACTCCAGGAAGCAGAAACCCTTTGTTCCATACCCTTTCTATTCCAATGTTGTTGATCTTGCCACTAACACCAACGTGCTTGTTCTGTGTTGTGCTCTGAATGACCAAACAAGGCACATCATCAACAGAGAAGTCATGGTGGCACTGGGAAAAGGAGGAGTTATTGTGAATGTGGGAAGAGGAGCTTTGATTCATGAAAAAGAACTGTTGAAGTGTTTGATGGAAGGGGAAATTGAAGGTGCTGGTTTGGATGTGTTTGAGAATGAGCCTCTTGTTGATGAACACTTCTTTTCCTTGGATAATGTAGTTCTCTCACCACACGCAGGTTTTTCCACGTTAGAGTCTTATGTTGCTATTTGCCAACTTCTGGGACGTAATTTGGAAGCTTTTTTCTCTGATAACCCTCTCATTACTCCTGTCATTTAG 1041 0.4813 MHSLPHHTSQPPSMEDQNQCKTSDQQLQNLNLPKVLLHGPPGFSSVLQPPYSEKFHLLNHSSLPLHQFAATHPHHCATVAAVLCDGGYPLTVDMLSLLPSLRLVVTASAGTDHVDLDECRRRGIQVAGAGNLFSEDVADLAVALLIDVVMKISAADRSLRKRHVDSRAITYASKVTGKRVGIVGLGRIGLEVAHRLEALNCKVSYNSRKQKPFVPYPFYSNVVDLATNTNVLVLCCALNDQTRHIINREVMVALGKGGVIVNVGRGALIHEKELLKCLMEGEIEGAGLDVFENEPLVDEHFFSLDNVVLSPHAGFSTLESYVAICQLLGRNLEAFFSDNPLITPVI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01708 346 Gene3D - 134 317 - -
Viun10g01708 346 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 33 341 - -
Viun10g01708 346 MobiDBLite consensus disorder prediction 1 20 - -
Viun10g01708 346 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 76 345 IPR006139 GO:0016616|GO:0051287
Viun10g01708 346 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 44 162 - -
Viun10g01708 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 315 IPR036291 -
Viun10g01708 346 CDD HPPR 33 337 - -
Viun10g01708 346 Gene3D - 70 340 - -
Viun10g01708 346 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 142 314 IPR006140 GO:0051287
Viun10g01708 346 FunFam Putative 2-hydroxyacid dehydrogenase 134 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01708 Viun-Chr10 32160905 32166837 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01708 K15919 - gmx:100777313 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01708 10 32160905 32166837 Viun10g01708 10 32160905 32166837 ECH