Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01706 ATGAACGGCGGTGGAGGTGACTTGCCACTGCCGCCGACGCCCTCTAACGGCGGTGAGTTCCTCCTCTCACTCATCCAACGCCCCCACCAACACCACTCACACCCGCGGCAACAGTCTCCGGCGATAGATCCCGCCGTCGCCGTCGTCGGTCCAACGATCCCCGTTGGCTCGCCGCAGTGGCAAATCGCCGGCGCCGATCACCAACACCCCCTTCCTCTCCCTCATCATCTTCCTCCTTGGTCCCACACTCTCTCTTCTCCGCTTTACCCTCCGAACTTTTTCGGGTTGCCCCATAACCCGTTTCCCCCTCCTCGGACCCACTTCCCCGTCAACCCGAACTCCGTCACTAACGGTGTCAACGTTAACGCTGGCCTCACCCACGATCTGCGAAAACTAGGGTTTCCCATCGAAGAAAAGAACAGCAAGGTCGATGGTTTCGTCCAGCAGCAAGAACTGAAACTGCAGTTCGGGTCTTTGCCCACGGTTGCGTACTCTGCATCTGAAGTTTCTCCCAATGTGGACTCGTTGCTCAATTTGAACTTCAACAGAGGGTACAACGGGTTCGACAGGAACTTGCATGTCGATCACCCCAGTTCTAATTCCAGTGGGAATGTGGTTCTTCAGGGTAATCATGATGTTGTGGACAGGGAAAGAAGAGGACTTGAGGGTTATACGGCTAGTGGGTCGTTGTCTCATGAGGCTAGTAGGGTTCCACCAGGGTTTGGGAACAGGAATAGAGGGAAGGGTTTGGAGGGTAGGAAAGATGGTAGGGTGGGGGGTGGGGAAATGGGTGGTGGTGGTGGTGGTAGGATTGAGAATTTGTATGGTAAGAGGGAAGGTGTGAGAATGGTTTCTGGTGAAAGGAGCAATGTTAGAGGCAATGTAGTTCGTGGAATGGGGCTTGTTGATCAGCTTGATCGCCCTGGGCCACCTGCTGGGAGTAACTTGCATTCCAGTGTTGTGAATGAGACTGGTGGAAGTGGGGCTCATGTTGATGTCCTTGGGGAGCAGTTGGCTGATTCATTGTTGATAGAGGATGACTCTGATGACAGGACCAACTCAAGGCAACGACGCGCCACTCGAGAGAAGGATGCCAGATCATCGGATTCAAGAGGGCAGCAGATCCTAAGCCAGCGGGCAAGAATGTACAAAAGGCAGTTAGTTTGTCGAAGGGACATTGATGTTCTTAATGTTCCTTTCCTTGCAATATATGAGTCTCTAATACCTCCTGAAGAAGAAAAGCAGAAGCAAAGGCAATTAGTAGCATTGTTGGAGAAATTAGTTAGCAAAGAATGGCCAGCAGCTAAGCTTTATCTCTATGGATCATGTGCTAATTCGTTTGGTGTCTCTAAAAGTGACATCGATGTTTGCCTTGCTATCGACGAAGCAGACATGGACAAAGCTAAGATTATAATGAAATTGGCGGATATTTTGCAATCAGATAATCTGCAGAATGTGCAGGCATTGACACGTGCACGGGTTCCCATAGTAAAGCTCATGGATCCAGTAACAGGAATCTCTTGTGACATATGCATTAACAATCTTCTTGCTGTTGTGAATACAAAGCTTCTTCGGGATTATGCGCTCATAGATCCAAGGTTACGGCAGCTAGCCTTCATTATCAAACATTGGGCTAAGTCAAGAAGAGTCAATGAAACTTACCATGGAACTCTGTCTAGCTATGCGTATGTTTTGATGTGCATTCATTATTTGCAAATGAGAAGACCTGCCATCCTTCCATGCTTGCAGGAGATGGAGACAACGTATTCTGTGACTGTCGATGATATTAGTTGTGCTTTCTTTGATGAAGTTGAAAAACTTGGTGATTTTGGTCGCCACAACAAGGAAACAATTGCTCAGCTTGTGCGGGGATTTTTCCACTATTGGGCATATTGTCATGATTATGCAAATTCTGTTATATCTGTGCGCACAGGAAGCATAATCAGCAAACGAGAGAAGGACTGGACTAGAAGGATTGGCAATGATCGGCATTTGATATGTATAGAGGATCCTTTTGAAACATCTCATGATCTTGGGCGAGTGGTAGATAAATATAGCATCAAAGTTCTGAGGGAAGAGTTCGAACGTGCTGCTGAAATTATGCAGAATGATCCAAATCCGTGTATTAAACTTTTTGAGCCTTATGTTCCCATTTGA 2157 0.4775 MNGGGGDLPLPPTPSNGGEFLLSLIQRPHQHHSHPRQQSPAIDPAVAVVGPTIPVGSPQWQIAGADHQHPLPLPHHLPPWSHTLSSPLYPPNFFGLPHNPFPPPRTHFPVNPNSVTNGVNVNAGLTHDLRKLGFPIEEKNSKVDGFVQQQELKLQFGSLPTVAYSASEVSPNVDSLLNLNFNRGYNGFDRNLHVDHPSSNSSGNVVLQGNHDVVDRERRGLEGYTASGSLSHEASRVPPGFGNRNRGKGLEGRKDGRVGGGEMGGGGGGRIENLYGKREGVRMVSGERSNVRGNVVRGMGLVDQLDRPGPPAGSNLHSSVVNETGGSGAHVDVLGEQLADSLLIEDDSDDRTNSRQRRATREKDARSSDSRGQQILSQRARMYKRQLVCRRDIDVLNVPFLAIYESLIPPEEEKQKQRQLVALLEKLVSKEWPAAKLYLYGSCANSFGVSKSDIDVCLAIDEADMDKAKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYALIDPRLRQLAFIIKHWAKSRRVNETYHGTLSSYAYVLMCIHYLQMRRPAILPCLQEMETTYSVTVDDISCAFFDEVEKLGDFGRHNKETIAQLVRGFFHYWAYCHDYANSVISVRTGSIISKREKDWTRRIGNDRHLICIEDPFETSHDLGRVVDKYSIKVLREEFERAAEIMQNDPNPCIKLFEPYVPI 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01706 718 PANTHER POLY A POLYMERASE CID PAP -RELATED 350 706 - -
Viun10g01706 718 MobiDBLite consensus disorder prediction 1 20 - -
Viun10g01706 718 Pfam Cid1 family poly A polymerase 618 676 IPR002058 -
Viun10g01706 718 MobiDBLite consensus disorder prediction 304 328 - -
Viun10g01706 718 Gene3D Beta Polymerase, domain 2 417 530 IPR043519 -
Viun10g01706 718 FunFam Terminal uridylyltransferase cid1 531 699 - -
Viun10g01706 718 Gene3D - 531 699 - -
Viun10g01706 718 MobiDBLite consensus disorder prediction 222 271 - -
Viun10g01706 718 MobiDBLite consensus disorder prediction 344 375 - -
Viun10g01706 718 SUPERFAMILY Nucleotidyltransferase 394 528 IPR043519 -
Viun10g01706 718 MobiDBLite consensus disorder prediction 344 369 - -
Viun10g01706 718 CDD NT_PAP_TUTase 418 528 - -
Viun10g01706 718 Pfam TUTase nucleotidyltransferase domain 411 510 IPR045100 GO:0016779
Viun10g01706 718 SUPERFAMILY PAP/OAS1 substrate-binding domain 532 704 - -
Viun10g01706 718 FunFam Terminal uridylyltransferase cid1 417 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01706 Viun-Chr10 32144462 32150195 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01706 - - gmx:100812787 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01706 10 32144462 32150195 Viun10g01706 10 32144462 32150195 ECH