Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01696 ATGGCCGGTTCAAAACCTGCAAGTGGTGAGGGAGAAACAATGGTTGTGGATGCTGCACCAAGGAGGCCCCGGATTCTGCTTGCTGCTAGTGGGAGTGTTGCTGCTGTAAAATTTGCAAATCTTTGTCATTGTTTCTCTGAATGGGCTGATGTAAGAGCAGTTGCCACAAGTGCATCTTTGCATTTCATTGATAGAGCTTCAATGCCAAAGGATGTAACTTTATACACTGATGACAATGAATGGTCTAGTTGGATGAAACTTGGTGATAATGTGCTTCACATTGAGCTTCGCAAATGGGCTGATATCATGGTCATTGCTCCATTATCAGCAAACACCCTTGGCAAGATTGCTGGAGGGTTGTGTGACAATCTACTGACATGCATTGTGCGAGCTTGGGACTACAGCAAGCCGTTTTTTGTTGCACCAGCCATGAACACTCTTATGTGGAACAATCCTTTCACCGAGCGGCATCTCATCGCCATTGATGAGCTTGGGATTTCTCTCATTCCACCTGTTACAAAGAGGTTAGCTTGTGGAGATTATGGCAATGGTGCCATGGCTGAACCCTCTACCATTTACTCAACTGTAAGGCTCTTCTATGAGTCAAAGGCTCAGCAAGGTAATGGTGATATCTGA 636 0.4528 MAGSKPASGEGETMVVDAAPRRPRILLAASGSVAAVKFANLCHCFSEWADVRAVATSASLHFIDRASMPKDVTLYTDDNEWSSWMKLGDNVLHIELRKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPFFVAPAMNTLMWNNPFTERHLIAIDELGISLIPPVTKRLACGDYGNGAMAEPSTIYSTVRLFYESKAQQGNGDI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01696 211 Gene3D - 22 210 IPR036551 GO:0003824
Viun10g01696 211 FunFam Phosphopantothenoylcysteine decarboxylase 17 209 - -
Viun10g01696 211 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 15 204 - -
Viun10g01696 211 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 22 199 IPR036551 GO:0003824
Viun10g01696 211 Pfam Flavoprotein 24 197 IPR003382 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01696 Viun-Chr10 31961768 31965404 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01696 K01598 - gmx:100499989 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01053 5 7227547 7230117 Viun10g01696 10 31961768 31965404 PCT
Viun10g01696 10 31961768 31965404 Viun5g01054 5 7227547 7230117 PCT