Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01596 ATGGAAGTGGGTATGCTTCCAATCTCAGCTTCTAAGAGAGGAAAACTCTTGGCTGCTGGTTACACCACTCTCGATGCCATTGCTCGTGCCTCCGCCTCCCACCTTGCTCGAGATATTGAAGTTTCTGATAGTGAAGCCTTGGAAATTCTGAATCTTGCAGCCAAAACTGGTGTTTCGGACAGACCAAATGGGACTTCAACTACTGTTGTTGGTGGTGGTCAGACTGCCTGGGATATGCTCAATGATGAGAAGTTTTCTTCTTACATTACCACATCTTGTGTGGATCTGGATAACATACTTGGCGGAGGAATTAAGTGTAAAGATGTCACTGAAATAGGTGGAGTTCCAGGCATTGGTAAAACACAAATTGGGTATTCTTTGATTCAACTTGCGGTAAATGTTCAGATTCCTCAAGGATACGGTGGCCTGGGTGGGAAGGCAATATACATCGACACAGAAGGAAGCTTTATGGTTGAACGAGTTCTTCAAATTGCTGAAGCATGCATAGAAGACATGGCTGAATATAGCAACCACTTTCACAAGGATTTGCAACCTTGTGAAGTTAAAATGCACCCTAATAATATCTTGGAAAATATATTCTATTTTCGTGTTTGTAGCTACACTGAGCAAATTGCCTTGATAAATTACTTAGACAAATTCATCATGGAGAATAAAGACGTAAAGATCATCATTGTTGACAGTGTTACTTTCCACTTCCGCCAAGACTTTGAAGATATGGCTCTCAGGACTCGATTACTCAGCGAAATGGCTTTGAAATTGATGAAGCTTGCAAAAAAGTTCTGTTTAGCAGTTGTTATGCTGAATCAAGTAACAACAAAGTTCATTGAAGGTTCATTTCAATTGACCCTTGCACTAGGAGATAGCTGGTCACATTCATGCACAAATAGGATAATATTATTTTGGAATGGCAATGAACGACATGCATTTATTGATAAGTCCCCTTCTCTGAAATCAGCATCAGCTCCATATTCTGTGACCAGTAGGGGCATACGAAATTCTACTTCAAGCTGCAAAAGGATCAAGATGATGTGA 1053 0.4055 MEVGMLPISASKRGKLLAAGYTTLDAIARASASHLARDIEVSDSEALEILNLAAKTGVSDRPNGTSTTVVGGGQTAWDMLNDEKFSSYITTSCVDLDNILGGGIKCKDVTEIGGVPGIGKTQIGYSLIQLAVNVQIPQGYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMAEYSNHFHKDLQPCEVKMHPNNILENIFYFRVCSYTEQIALINYLDKFIMENKDVKIIIVDSVTFHFRQDFEDMALRTRLLSEMALKLMKLAKKFCLAVVMLNQVTTKFIEGSFQLTLALGDSWSHSCTNRIILFWNGNERHAFIDKSPSLKSASAPYSVTSRGIRNSTSSCKRIKMM 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01596 350 Gene3D - 69 341 IPR027417 -
Viun10g01596 350 CDD Rad51C 109 321 - -
Viun10g01596 350 ProSiteProfiles RecA family profile 1. 85 277 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Viun10g01596 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 338 IPR027417 -
Viun10g01596 350 FunFam DNA repair protein RAD51 72 341 - -
Viun10g01596 350 PIRSF Rad51 1 343 IPR016467 -
Viun10g01596 350 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 350 - -
Viun10g01596 350 Pfam Rad51 74 339 IPR013632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01596 Viun-Chr10 30906294 30909647 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01596 K10870 - gmx:100527406 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01596 10 30906294 30909647 Viun10g01596 10 30906294 30909647 ECH