Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01550 ATGTTCATAACCCTTCAACTAGACTCAACTCATAGAATCATTATAGCTTTGAAACTCTCATATCTGCTATTTCTCCTTTCTTCAATTCCTAATGCCTTAGGCTACACTAGCAGAGCTCACATCTTCATTTATGCTGGGTGCTCTCAAGAAAAATACCAACCAAACACACCCTTTGAAGCGAACCTCAATTCCTTCTTGTCTTCAGTTTCTGGTTCATCTTCTGAGAATTCCTACAACAGCTTTGCTATTGGAAATGGAAGCTCATCACCAGCAGAGGGATCCATATACGGGTTATACCAGTGCAGGAGTGATTTGAGGCCAAATGAATGCTCAAAATGTGTTAAAAGTTGTGTTGACCAGATAGGGTTGGTGTGTCCCTTGGCACTAGGGGCATCTCTGCAACTTGAAGGGTGTTATATCAGATATGAGCATGGTGATTTCCTTGGAAAACCTGACACGAGCCTTTGGTACAAGAAGTGTAGTAAAGCGGTGACAAGTGATGCTGAGTTCTTGAGGCGTAGGGATGATGTTCTTTCTGATTTGCAAGCAGTGAATGGATTTGGAGTGAGTAGTTCTGGTTTTGCTGAAGGGTTTGCACTGTGTTTGGGAGATTTGAGTGTGGCTGATTGCTCCTCGTGCCTTCAAGCAGCAGTGGGAAAGCTTAGGAGCATTTGTGGTTCAGCAGCATCAGCTGATGTGTTCTTGGCTCAATGTTATGCTCGCTACTGGGAAGCTGGCTACTATGATCAAGCAGAATCTTCTAATGAGGATGACCAAGTGGGAAAATCAGTTGCCATTATGGTGGGAGTGCTTGCTGGTTTAGCCATTATTGTTGTCCTTCTCTCAATCTGCAGAAGAGCATTTGGTTAA 870 0.4356 MFITLQLDSTHRIIIALKLSYLLFLLSSIPNALGYTSRAHIFIYAGCSQEKYQPNTPFEANLNSFLSSVSGSSSENSYNSFAIGNGSSSPAEGSIYGLYQCRSDLRPNECSKCVKSCVDQIGLVCPLALGASLQLEGCYIRYEHGDFLGKPDTSLWYKKCSKAVTSDAEFLRRRDDVLSDLQAVNGFGVSSSGFAEGFALCLGDLSVADCSSCLQAAVGKLRSICGSAASADVFLAQCYARYWEAGYYDQAESSNEDDQVGKSVAIMVGVLAGLAIIVVLLSICRRAFG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01550 289 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 16 287 - -
Viun10g01550 289 Pfam Salt stress response/antifungal 160 242 IPR002902 -
Viun10g01550 289 Pfam Salt stress response/antifungal 47 144 IPR002902 -
Viun10g01550 289 Gene3D - 39 147 IPR038408 -
Viun10g01550 289 Gene3D - 153 245 IPR038408 -
Viun10g01550 289 FunFam cysteine-rich repeat secretory protein 3 39 147 - -
Viun10g01550 289 ProSiteProfiles Gnk2-homologous domain profile. 40 147 IPR002902 -
Viun10g01550 289 ProSiteProfiles Gnk2-homologous domain profile. 149 247 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01550 Viun-Chr10 30555854 30558356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01550 48 251 Receptor kinase-like Gene Family AT4G23160 25.431 1.59e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01550 - - gmx:100809227 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01550 10 30555854 30558356 Viun10g01550 10 30555854 30558356 ECH