Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01505 ATGGCAAAAATCACAGAAGAATCCGAAATGGCGAAGCGCGGAACCTCTGATTCCGAATCCGAGGATGCTTCGGTATCAGGGTCTGAGTCCGAGGAGACACACACGATGGACAATGGGAAGAAGGGTGTGACGGAATACGAGAAACAGAGGCTGTCGAGAATCGCGGAGAACAGAGCCAGGTTGGAGGCTCTGGGGTTGCCCAAAATGGCTCTCTCCTTGAAAAGTTCTCATCTTCGCACCGCTAAGAAGGAAAAAGAGAAGGTTAAAGAAGACGATGATGAAGAGTATGTACCCGAAGACGAGGGAGGACCCGGTTCAAGTTCTTCAAGTGATCATGATGAAGACAGTAAAGATGAAGACTTTGCTACTAAAAATTCTTCTGGGTCACGGAAAAGGAAGGGGAAGAGCAAAGGTTTGCAAAAAAAAGCCGGAGTCTTTCGGAAGAAGGATGTTGATAATTCAGAGTACATTGATGATGATGAAGCTTTGAGGCAGGCAATTGCTCTTTCCTTGCAAGACTCTGCCGAAGGTTCACGTTTACCTGACCAGAATGTATTGAACATTAACAAGACTGACAAAAAGGGTAACAATCAAACTCAAGAAGATAAGGGAAGAAAGAAGAACAAAAAATCGTTTGCAAGTCGGCTGCAACTCACAGAGGATGAGCTCATTGGACACTTCTTCCAGCTTGATGAAGCTGGAAAAGGAACTTTAAATGTAAGGGATATACAAAGGGCAGCTGCAGCTCATGATTTTTTATGGACAGACAAAGAGTTAGTTGATATGATCCGCTGCTTCGATAGTGATGGAGATGGAAAGCTATGCCTAGATGATTTTCGGAAGATTATGGTACGTTGCAACATGATTATAGAGTGA 876 0.4406 MAKITEESEMAKRGTSDSESEDASVSGSESEETHTMDNGKKGVTEYEKQRLSRIAENRARLEALGLPKMALSLKSSHLRTAKKEKEKVKEDDDEEYVPEDEGGPGSSSSSDHDEDSKDEDFATKNSSGSRKRKGKSKGLQKKAGVFRKKDVDNSEYIDDDEALRQAIALSLQDSAEGSRLPDQNVLNINKTDKKGNNQTQEDKGRKKNKKSFASRLQLTEDELIGHFFQLDEAGKGTLNVRDIQRAAAAHDFLWTDKELVDMIRCFDSDGDGKLCLDDFRKIMVRCNMIIE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01505 291 ProSiteProfiles EF-hand calcium-binding domain profile. 254 289 IPR002048 GO:0005509
Viun10g01505 291 ProSitePatterns EF-hand calcium-binding domain. 267 279 IPR018247 -
Viun10g01505 291 MobiDBLite consensus disorder prediction 106 127 - -
Viun10g01505 291 MobiDBLite consensus disorder prediction 59 145 - -
Viun10g01505 291 MobiDBLite consensus disorder prediction 1 19 - -
Viun10g01505 291 MobiDBLite consensus disorder prediction 176 194 - -
Viun10g01505 291 Pfam EF-hand domain pair 222 283 IPR002048 GO:0005509
Viun10g01505 291 MobiDBLite consensus disorder prediction 128 142 - -
Viun10g01505 291 MobiDBLite consensus disorder prediction 77 92 - -
Viun10g01505 291 MobiDBLite consensus disorder prediction 1 45 - -
Viun10g01505 291 MobiDBLite consensus disorder prediction 175 211 - -
Viun10g01505 291 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 158 177 IPR003903 -
Viun10g01505 291 MobiDBLite consensus disorder prediction 195 211 - -
Viun10g01505 291 SMART efh_1 258 286 IPR002048 GO:0005509
Viun10g01505 291 Gene3D - 124 287 - -
Viun10g01505 291 SUPERFAMILY EF-hand 144 284 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01505 43 289 EF-hand Containing Proteins AT1G73440 41.129 8.17e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01505 - - var:108347013 429.098