Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01503 ATGAGTTCCGCCGAGCTCCTCCACATACAGCCCCAGGAGCTTCAGTTCCCCTTTGAATTGAGGAAGCAGATCTCATGCTCTTTGCAGTTGTCTAACAAGACAGACAACTATGTGGCTTTCAAGGTTAAGACAACAAATCCTAAGAAATACTGTGTTAGACCTAACACTGGAGTTGTGATGCCTAGGTCTACATGTGATGTCATAGTAACAATGCAAGCACAAAAGGAAGCACCCCCAGACATGCAATGCAAAGATAAGTTTCTCCTTCAGAGTGTAGTTGCAAGCCCTGGTGCAACCACAAAAGATATCACTCCAGAAATGTTCAATAAAGAATCTGGTCATGATGTTGAAGAGTGCAAGTTGAGAGTTGTTTATGTTGCTCCTCCTCAACCACCATCCCCTGTTAGAGAAGGATCTGATGAAGATTCTTCACCTCGTGCATCTGTGTCTGAAAATGGCCATTCAAATGCTTTGGAATTTAATGTGGCTTCAAAAGCTTTCAATGAGCGGGGTGAGCATCAGGACACTTCTTTTGAGGCAAGAACTCATATTTCAAAGGTAACTGAGGAGAGGAATTATGCTATTGAGCAAAACAAAAGACTTCAGCAAGAACTGGAGCTTTTGAGGCGCCAAGTCGGCAGTCGGCGCAGCGGCGGCGGCATACCGTTCATGTACGTAGTTCTTGTTGGCATCATTGGCATCATTCTGGGTTTCCTGTTAAAGAGGACGTGA 732 0.4467 MSSAELLHIQPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVMPRSTCDVIVTMQAQKEAPPDMQCKDKFLLQSVVASPGATTKDITPEMFNKESGHDVEECKLRVVYVAPPQPPSPVREGSDEDSSPRASVSENGHSNALEFNVASKAFNERGEHQDTSFEARTHISKVTEERNYAIEQNKRLQQELELLRRQVGSRRSGGGIPFMYVVLVGIIGIILGFLLKRT 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01503 243 FunFam Vesicle-associated protein 1-1 1 129 - -
Viun10g01503 243 MobiDBLite consensus disorder prediction 127 155 - -
Viun10g01503 243 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 239 IPR016763 GO:0005789
Viun10g01503 243 Coils Coil 184 211 - -
Viun10g01503 243 Gene3D Immunoglobulins 1 130 IPR013783 -
Viun10g01503 243 SUPERFAMILY PapD-like 2 140 IPR008962 -
Viun10g01503 243 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Viun10g01503 243 PIRSF VAMP_assoc_prot 1 242 IPR016763 GO:0005789
Viun10g01503 243 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01503 Viun-Chr10 29585021 29588650 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01503 - - gmx:100779655 411.379