Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01499 ATGCTTCTAACAATTCTCATGCTCCCTTCAACCACCCTTTTCAAACCGCCACTTCATCACGTTAAGCATATGCTTTTTAATATTCTAGCAAACTTAGCTCATAAATTCCCCTCTCTAACCCCTTTTTTTTTCTACCTTCATCACATTTCATTCATATTACACCAACCCTTTTCTGCATTTCATCTTCTTCACACTGTTTATTCGTTAAAAAAACACATTTTTTTTCCCAACGTTATGAAGTTTGGAAAGAGACTGAAGCAACAGATTCAGGAGTCGTTGCCGGAGTGGAGGGACAAGTACTTGTCGTACAAGGAACTGAAGAAGCTGGTGCGTCTCATATCGGAGGCACCAACGTTGTTGAATGGTTCCTTGGAATATGGCAAAACCGAGGCTGAGTTCATGTGCTTGTTGAAAATTGAAATAGACAAGTTCAATGGCTTCTTCATGGAGAAAGAAGAGGATTTCATCATTCGCCACATGGAAGTACAACAGAGAATAAAGAGAGTAGTTGATTTATGGGGACCAAATGGCAGTGCACCCTCAGAAGCAGATTATAAAGAAGAGATGGCAAAAATCAGAAAAGCTATAGTTGATTTCCACGGTGAAATGGTTCTTTTAGTAAACTACAGCAACATCAATTACACAGGATTGGCTAAAATTCTGAAGAAATATGACAAGAGGACAGGGGGGCTTCTGCGTTTGCCATTCATTCAGAAAGTGTTGGAGCAGCCTTTTTACACAACAGATCTAATTTCAAAGCTTGTGAAGGAATGTGAATGCATAATCGATGCAGTGTTCCCTGCTGAGGAAGAAGCAGAGAGAGCAAAGGAAGCAAAAGAGGCCATCACTGTTGCAGGAGAAGGAATATTCAGAAACACAGTTGCAGCTTTACTTACAATGCAAGAGATGAGAAAAGGTAGCTCCACTCAGAGTCCTTTCTCTCTGCCTCCACTCAACCTGCCAGACTCTGATCTCATCCAATCAATTCAGCTCAATGCTGCAGTTCCCATTGTGTAG 1017 0.411 MLLTILMLPSTTLFKPPLHHVKHMLFNILANLAHKFPSLTPFFFYLHHISFILHQPFSAFHLLHTVYSLKKHIFFPNVMKFGKRLKQQIQESLPEWRDKYLSYKELKKLVRLISEAPTLLNGSLEYGKTEAEFMCLLKIEIDKFNGFFMEKEEDFIIRHMEVQQRIKRVVDLWGPNGSAPSEADYKEEMAKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLEQPFYTTDLISKLVKECECIIDAVFPAEEEAERAKEAKEAITVAGEGIFRNTVAALLTMQEMRKGSSTQSPFSLPPLNLPDSDLIQSIQLNAAVPIV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01499 338 CDD SPX_AtSPX1_like 80 227 - -
Viun10g01499 338 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 79 320 IPR031142 GO:0016036
Viun10g01499 338 ProSiteProfiles SPX domain profile. 79 238 IPR004331 -
Viun10g01499 338 Pfam SPX domain 181 239 IPR004331 -
Viun10g01499 338 Pfam SPX domain 79 114 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01499 Viun-Chr10 29443822 29451229 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01499 - - vun:114166417 655.981