Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01494 ATGGCTCACCACCAACTCATCGACTCGCTCACCTCGCACATCTCCCTCTACCACTCCCAATCCCCAAACCCCAACCCTAACCCTAATCCTAACCCTCGATCCTCCATTCTCAAATGGTTCTCTTCTCTTTCAATTCACCAACGCCAGGCCTATCTAACCGTCGTCGACGGGAATTTCGTCCAGATCCTCCTCCAGATGCTGGCCAAGCTCCGATCTCACGGCCACGGCTCCTTCATTCTCCTCCCCGACCTCCCCTCGCCCAACAACCTCCCCACCCTCTGCTTCAAAAAGTCCCGCGGCCTTATTGCGCGCGTGGCTGAATCCGAAACAGCAGGGCGGGCGGTGTTCGAGTCCGCCCGGTTGTTCGAGTCGCGTGAGGGCGAGGAGGCCGCCAATTCACTGCCGCCCTCGGCGAGGCGGCTAGACGCGCTGACCTTTGCCGAGGGGTTTGTTGGGAATGTGGACCAGTTTGTGGAGGCAATGGACCGGATCTCCGGTGGTGGGTTCCTCCGGGGGGATGAGGCCGAGCTTGGAGAGGATTGGGTCGAGCTGCATTGGCTCAAAGCGAAGGGGTATTATGGTATTGAAGCGTTTATTGCGAATAGGATGGAGGTTTCGATGAGATTGGCTTGGTTGAATTGCTGTGGAGGGAGGAAGAGAGGTGTGAAGTTGAAGGAGAAGATGAGTGCTGCGGGTGTTGGTGTGAATGTATTTTGGAGGAAGAAGGGGTGCGTTGATTGGTGGGCGAACTTGGATGCTGGCACCAGGAGAAAGGTCTTCACCACCTTCTTTATGAAAGCTGCAAAACCCTTGACTCGTGATGTTTTGGAAGTGTCAAGTAGTGCCTCTGATGATGAGATTTGCCTATACAGTGCGGGAGTGGATAAATTAATGCAACACAATCGTCCTATGTCAGCTCAACGGATCATCTCATCTCTTCCTGTTGATATGGAATTTGGAACAGTTATTTCACCAGTTTCTTTATGTAAAAAACCAGCTGCTTTAGCCAGAGCCTTCAATTCTTTATTAGTACTTCATGATGTTAATATGATGGTAGCATCAAATCTTAATAGTGAATATGACATAGGAAAGCTTTTCTTTAGTTCTTTGGGTTCTGTCTGTACGATATCTGATTGTATATTAAGAAAAATGCGAGGATTTTTTATGGTTATTTCACTTGACTGCACAAAACTTGAACTATTAGGAGAGGCACTTGAAAAGTCTTCATCAGATAAACCTAAAGAAAAGCTTAGTGTTTCTAACCGGAAAAAGAAGGGACGAAATCGCAATACTAAACGGCAAAATCCTGTCTCAAAGACCTGCACAGATGGTATTTCACATGAAAATCCACTCAAGGATACTGATTGTAAAGGGGATAATAAAAAGAAGACTGATTTAGTGGGATCCAGAGAACTTCCTGCTGTCTGTATGGGGAAGGAGATTTCAATGGAGTGCTCATCATCAACTGTAAAAATGGATCATACTCAAGGATTGGATGTTGGCACAGTAAAAGTACGGACCACTTCAAGAAGAAGTAGAAAAGAGAAAAATAAAAGTAAAAACATCATCATTGATAGTGCAGGTGGAAATTCTCATAAATCAATTATGCATGCTGCCTCTACCACTGTTGTTTCTGAAGGTGAGGTGGCAATATGTGATAGATTTTTGAATAGTTCTACCATTCAGAATGTCAAAAATGACAATTCAATTGGTAATGACATCCTTACTTCAAATTCAAGCCATTGTAGTAATCTTAGTGGGCTTACTAAGGAGAACAGTTCTACTGGAAAAGTTGAAGGAGAGACAGAAGATCTTGCTGAATCTGGGAATAGTTTAGGGCCTCAATGTTGTTTATTATCAGATGAAAGGAAAACTTTATGTTCTGGATTAGATACTTTTACATGTGATTTAGATTGTAATGCTGTTGTAACTCCTCCTGTACCTGCATTGAAACAAGGTAGCTTCTTCAGCAAGGAAGATACCTGTCATTTGAACTCATTGCGTGTTGCCAAAACCGATATAAAGTCTACTGCTCCTGACAAACCAATTAGAGAGGTTAATGTAAAAGAATTTGGGCGGTTGAATGAGCATGATAGATGTCTATTTGAGAGTAGAAATTCAGCTTTCTCAAAGTGCAGTCCATATGAGTGGCCTGGGGTACCTTCTATTTATTTTCCATCTTTTAATTCACACCTCCCTCCTGCCACGGATAGATTACATCTTGATGTTGGGCGGCATTGGCACAATCACTTCTGCCATCCATTTGTTCCCACATTACAGCAGGCAAGAAATCCTTCTATTGAAGGTGGATGCAACCCAATCCTCTCTCGTCCTATTCCTATGAGTTTTGACTGGCCCCCAGTCTTCCGAGGATGCAGGTCCCCATCACCAAACTATAATTATGACTCTGGTCTTATATCTAGGAAGCAATGCACCTTTTCAAAAGGATTGGCTGTTCACAGTATGCAGGTTGATGCAACTGCTCCTGATGATGAAAGAAAATATTCTGGGGATGCATGGGATTTACCTGACCTAACAAACACAATGGAGCTAGCAGATGAATTTGACAATCACTGTTTATCTGAGGAAGAATATGAGGTTCATGCTGTTTCTGGTATAGATTATAATCAATATTTTGGTGGAGGCATAATGTACTGGAACCCTTCTGATTACCCAGGAAAGGGTTTCTCCAGGCCTCCCTCACTTAGCTCTGATGACAGTTTATGGGCTTTGCGTGAAGCTGACATGAATAGGACTGTGGATGATATGGTTGCTTGCACATCTTCATACAGTACGAATGGTTTAACATCACCCACAGCTGCTGCATTTTGTTCTCCTTTTGATCCTGTAGGGACTGGGACCCAGACTGTTGGTTACATGATGTCAGGTAATGAAGTACCTGGAAAGATATTGCATTCTTCTTCAGTTACTGATCCAGCAGTGGATGAAGATACTTCTGGTTCTTTGGGTAGTGGTTTACCTGGAGAAGTTGAAGGAAAGGCAGGTGATTCACATCCATATCCCATTCTAAGGCCAATAATTATTCCTAACTTGTCAAGGGAAAGGTTTGATCATAAAAGTCCCTGTGTTCCTCCCACCAGGCGGGAGCAGCCTCGCATAAAGCGGCCTCCATCACCTGTTGTGCTTTGTGTACCACGTGCACCACGTCCACCCCCTCCTTCTCCTGTGAGTGACTCCAGGAAACACAGGGGTTTTCCAACGGTTAGATCTGGTAGTTCCAGCCCAAGGCACTGGGGGATGAGAGGCTGGTATCATGATGGAAATAATTTGGAGGAAACATGTTTAAGAATGGATGGTGCTGAAGTTGTGTGGCCTTGGAGAAGTAATAATCTTGCAGTACGACCTTTGATTCAGCCTTTACCTGCTGCCTTGCTGCAGGACCGCCTGATTGCATTATCACAGATAGCACGTGACCAGGAACATCCGGATGTCACCTTTCCCTTGCAACCTCCTGAGTTACAAAGCTGTTCTGCACAGGGTATATCTTTATCTGTGATGCATGGTATTCTCCATGATGAGATTGACTCTTTCTGTAAACAGGTTGCTGCAGAAAACATGGCCAGGAGGCCATACATTAATTGGGCTGTCAAGAGAGTGACCCGATTTCTGCAGGTTCTATGGCCTAGATCACGGACAAACGTATTTGGTTCCAATGCAACTGGTATGTCCCTTCCGACAAGTGATGTTGACCTTGTCGTTTGTCTACCTCCAGTGAGAAACCTGGAACCTATTAAAGAAGCTGGAATACTGGAAGGTCGTAATGGGATTAAAGAAACATGTCTTCAGCATGCAGCTAGGTATCTTGCCAATCAGGACTGGGTGAAAAATGATTCTCTGAAGACAGTGGAAAATACAGCTATTCCTATTATTATGCTTGTGGTGGAAGTACCTCAGGATGTTATTACCTCCTCGGCTCCTATTATACAGTCATTAAATGAAAACCCACATCGTACTCCAGGTGAACATGGTAGCGATAATAATTCAGATACCATCCAGTTAGAAGATTTGGCTTCGCCAAAAGGCTCCCAAATGAAAATTGATGCTTTGAAATCGAAATCAGTTCGTCTGGACATCAGCTTTAAGACCCCTTCTCATACTGGACTCCAGACTACAGAAATGGTTAAGGAGTTGACAGAGCAATTTCCTGCTGCTACACCTCTTGCTCTGGTACTAAAACAATTTCTGGCTGATAGGAGCCTTGATCAATCCTACTCCGGTGGCTTAAGTTCCTACTGTTTGGTCTTACTAATTATACGATTTCTTCAGCATGAGCATCATCTAGGCCGTCCAATCAACCAAAATTATGGAAGCCTTCTGATGGATTTTCTCTACTTTTTTGGGAATGTGTTTGATCCTCGCCAAATGCGGATATCAGTTCAGGGAAGTGGACTTTATATAAAGAGAGAAAGAGGTTGTAGCATTGATCCAATTCACATAGATGATCCCCTTTTCCCAACTAATAATGTGGGGAGGAATTGCTTCCGAATTCATCAATGCATTAAGGCATTTTCAGAAGCTTACTCTGTTCTTGAAAATGAACTCAAATTCCTAAATAGTGATGGTGAGTCAAGTTCAAGGCCACCTTACAGACTGCTTCCAAAAATCATTCCAAGTCTTGATAAAGAACATGAAGACTGA 4659 0.4392 MAHHQLIDSLTSHISLYHSQSPNPNPNPNPNPRSSILKWFSSLSIHQRQAYLTVVDGNFVQILLQMLAKLRSHGHGSFILLPDLPSPNNLPTLCFKKSRGLIARVAESETAGRAVFESARLFESREGEEAANSLPPSARRLDALTFAEGFVGNVDQFVEAMDRISGGGFLRGDEAELGEDWVELHWLKAKGYYGIEAFIANRMEVSMRLAWLNCCGGRKRGVKLKEKMSAAGVGVNVFWRKKGCVDWWANLDAGTRRKVFTTFFMKAAKPLTRDVLEVSSSASDDEICLYSAGVDKLMQHNRPMSAQRIISSLPVDMEFGTVISPVSLCKKPAALARAFNSLLVLHDVNMMVASNLNSEYDIGKLFFSSLGSVCTISDCILRKMRGFFMVISLDCTKLELLGEALEKSSSDKPKEKLSVSNRKKKGRNRNTKRQNPVSKTCTDGISHENPLKDTDCKGDNKKKTDLVGSRELPAVCMGKEISMECSSSTVKMDHTQGLDVGTVKVRTTSRRSRKEKNKSKNIIIDSAGGNSHKSIMHAASTTVVSEGEVAICDRFLNSSTIQNVKNDNSIGNDILTSNSSHCSNLSGLTKENSSTGKVEGETEDLAESGNSLGPQCCLLSDERKTLCSGLDTFTCDLDCNAVVTPPVPALKQGSFFSKEDTCHLNSLRVAKTDIKSTAPDKPIREVNVKEFGRLNEHDRCLFESRNSAFSKCSPYEWPGVPSIYFPSFNSHLPPATDRLHLDVGRHWHNHFCHPFVPTLQQARNPSIEGGCNPILSRPIPMSFDWPPVFRGCRSPSPNYNYDSGLISRKQCTFSKGLAVHSMQVDATAPDDERKYSGDAWDLPDLTNTMELADEFDNHCLSEEEYEVHAVSGIDYNQYFGGGIMYWNPSDYPGKGFSRPPSLSSDDSLWALREADMNRTVDDMVACTSSYSTNGLTSPTAAAFCSPFDPVGTGTQTVGYMMSGNEVPGKILHSSSVTDPAVDEDTSGSLGSGLPGEVEGKAGDSHPYPILRPIIIPNLSRERFDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKHRGFPTVRSGSSSPRHWGMRGWYHDGNNLEETCLRMDGAEVVWPWRSNNLAVRPLIQPLPAALLQDRLIALSQIARDQEHPDVTFPLQPPELQSCSAQGISLSVMHGILHDEIDSFCKQVAAENMARRPYINWAVKRVTRFLQVLWPRSRTNVFGSNATGMSLPTSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKNDSLKTVENTAIPIIMLVVEVPQDVITSSAPIIQSLNENPHRTPGEHGSDNNSDTIQLEDLASPKGSQMKIDALKSKSVRLDISFKTPSHTGLQTTEMVKELTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLENELKFLNSDGESSSRPPYRLLPKIIPSLDKEHED 1552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01494 1552 MobiDBLite consensus disorder prediction 974 1005 - -
Viun10g01494 1552 Gene3D - 1349 1543 - -
Viun10g01494 1552 MobiDBLite consensus disorder prediction 1317 1339 - -
Viun10g01494 1552 PANTHER POLY(A) RNA POLYMERASE 418 1543 IPR045862 GO:0043631|GO:1990817
Viun10g01494 1552 Pfam Nucleotidyltransferase domain 1204 1247 IPR002934 GO:0016779
Viun10g01494 1552 Gene3D Beta Polymerase, domain 2 1191 1309 IPR043519 -
Viun10g01494 1552 MobiDBLite consensus disorder prediction 1048 1064 - -
Viun10g01494 1552 MobiDBLite consensus disorder prediction 411 446 - -
Viun10g01494 1552 Coils Coil 1507 1527 - -
Viun10g01494 1552 MobiDBLite consensus disorder prediction 1024 1080 - -
Viun10g01494 1552 SUPERFAMILY PAP/OAS1 substrate-binding domain 1389 1521 - -
Viun10g01494 1552 MobiDBLite consensus disorder prediction 585 606 - -
Viun10g01494 1552 SUPERFAMILY Nucleotidyltransferase 1179 1384 IPR043519 -
Viun10g01494 1552 MobiDBLite consensus disorder prediction 1024 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01494 Viun-Chr10 29384496 29397708 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01494 - - ccaj:109818618 2242.23