Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01491 ATGGATTATTCGGGCTACAACTACCAGCAGCAGCAACAACAACATTCCTATGGCTACGACCCTTCTCAGATCCAAATCCAACCCTACGATCAATCCTATGCCTATCAACAATACTACGCATACAATTCCCAATACGCTTATTTTCCCAACACACATCAAGGCCAGTTTCAATTCCAATCCGAACCCGCTCCTCTTCACCCTCCCGGAGTCAACCCCACCGTTCCGGAGTCCGCCCCGACTGGACCATCTCAATACAGAGGTAGGGGTGGCCGGGGTGGTAGACCATTTAGAGGGGCTGGTCGTGGTCGGGGCCATGGTAGGGGCCATGGTGTGGGGGGTGGTAGACACGCGCCATCTCATTCTTCTGGTGCTGCTATTTCTCATGCGGCAGGTGCACCTGCAGCTGCTGGGACTGGTTCAGCGATAGACCCTTCATCATCAGTCTCTGTGCCAACACAATTACCTAAACAAGCTCGAGTGCAACCACCAGCACCACGTAAGGTATGCTGTGAAATTTGTAAGGTTGAGTGCAATACTCCAGAAATCTTGGAGCAACACAAGAATGGGAAGAAACATCAGAAGAATATGAGGGTGCATGAAGAACTGCAAAGGCGCAATGCTCTAAATGGACAACAGAATGCGCAAATTCCTACCTCTCAATTGAATTTGACAGATCAACCTAAGCAAGTTCAGGAGTCTGAGAATAATGGATCCCCAGCAGAAAATTTGGGCTCGAGGGTTATAGTTAATAATAATCACGAGGACGAAACTCAGCAGCAGAATAATGTAGGAAACATTTCCGAGGCTTCTGAAGCACCTGAGGCAAAAAACACGGATAACTCTGCCGCCACAAGAGGCCGAGGAATAAAGCGGAAGAAGAAAGGAGGAGGAAAAGGGGGTAAATACATGAGAACCAATGATGGTTTAAAGCCTGTGGAACCTGCACAAACCATGTCTTTTAGATGTGAGTTGTGTGACGTTAAATGTGAGTCACAAGTTGTTTACCAGAGTCATGTGACTGGGAAAAAGCACTTATCGAAACTAAGGCGTGCTCATGATCCCCAAGCTTCATCTGGAGTAGGCCAGCAGCCAGCTCTGTCTGGAGCACTCTTGGGGCTTCAAGCCCTTTACCCTCCTGACATCAATGCTCTGTCTAATGCTATTAATGCTCAAGTACAACAAGGTGATAACGATCCACAGGTACTTTTGGCTCAGCTCCTGATGACTGTACTATCTCAAGCACAAGTTACAGCAGCATCCCAAGTGACAGGTGTCACTGCTGCTCAGATGCCTGGACCCATATCTATGGCTGGACCAAGTTATGAACCCCAGTTGTTGCAGACACAAGTATCAGAAATCACACCACATGTTAATTTGGAAAATCCTTCTGGGGAAACAAAAACTGAGGTGTTACCTGATCCATCACTGGAGTCAAAAGCTCAGCAAGGCTCAAGTGTCAGCACCCAAATTGAAGGTGGTGGTTCTGAAACTAAACAATCGGTGTAA 1506 0.4754 MDYSGYNYQQQQQQHSYGYDPSQIQIQPYDQSYAYQQYYAYNSQYAYFPNTHQGQFQFQSEPAPLHPPGVNPTVPESAPTGPSQYRGRGGRGGRPFRGAGRGRGHGRGHGVGGGRHAPSHSSGAAISHAAGAPAAAGTGSAIDPSSSVSVPTQLPKQARVQPPAPRKVCCEICKVECNTPEILEQHKNGKKHQKNMRVHEELQRRNALNGQQNAQIPTSQLNLTDQPKQVQESENNGSPAENLGSRVIVNNNHEDETQQQNNVGNISEASEAPEAKNTDNSAATRGRGIKRKKKGGGKGGKYMRTNDGLKPVEPAQTMSFRCELCDVKCESQVVYQSHVTGKKHLSKLRRAHDPQASSGVGQQPALSGALLGLQALYPPDINALSNAINAQVQQGDNDPQVLLAQLLMTVLSQAQVTAASQVTGVTAAQMPGPISMAGPSYEPQLLQTQVSEITPHVNLENPSGETKTEVLPDPSLESKAQQGSSVSTQIEGGGSETKQSV 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01491 501 MobiDBLite consensus disorder prediction 475 501 - -
Viun10g01491 501 SUPERFAMILY beta-beta-alpha zinc fingers 162 200 IPR036236 -
Viun10g01491 501 SMART ZnF_U1_5 165 199 IPR003604 GO:0003676|GO:0008270
Viun10g01491 501 SMART ZnF_U1_5 317 351 IPR003604 GO:0003676|GO:0008270
Viun10g01491 501 Pfam Zinc-finger of C2H2 type 170 192 - -
Viun10g01491 501 Pfam Zinc-finger of C2H2 type 320 344 - -
Viun10g01491 501 MobiDBLite consensus disorder prediction 457 501 - -
Viun10g01491 501 SUPERFAMILY beta-beta-alpha zinc fingers 312 350 IPR036236 -
Viun10g01491 501 MobiDBLite consensus disorder prediction 205 310 - -
Viun10g01491 501 Gene3D Classic Zinc Finger 152 201 - -
Viun10g01491 501 Gene3D Classic Zinc Finger 301 351 - -
Viun10g01491 501 MobiDBLite consensus disorder prediction 58 162 - -
Viun10g01491 501 MobiDBLite consensus disorder prediction 140 156 - -
Viun10g01491 501 MobiDBLite consensus disorder prediction 205 284 - -
Viun10g01491 501 PANTHER OS06G0651300 PROTEIN-RELATED 7 413 - -
Viun10g01491 501 SMART c2h2final6 320 344 IPR013087 -
Viun10g01491 501 SMART c2h2final6 168 192 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01491 Viun-Chr10 29358571 29364321 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01491 - - vra:106780092 665.996