Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01446 ATGGAAATAAATTCTTTAACACTCCCCTCTTCTCGTATGTCCATTCTGCTGAAGGACTCTCCCAGTGGCGCTCCTCAACAACACAACAAGATAATCTGGAGGAGGAATGAAAAAAGAGCTTTTGATGGTACACACAGCAGTGTAGATAGTTCTTCATTGGTTCAAAACAATAGTAGGAAAAGAATGTTTCCTCAATCTGATGGGGTTTTTCATGATACCAAAGTTGATGTTTCTATGCCAAAACAGACTTCTTTGTGTGTTTTGATGCTACATTACACAGAAAATGGTCTCTTTCCTCAAGCACAGACTACATGGGAGCAGCTCCTATATAGTTCTTTTGTACCTTCTGTTGAATTTATTTCAAGACTATTTGATGCTTATGCAAAACATGGAAAATTCGATGAAGTGGTCAATATCCTACGCTATGTGGATATGAGGAAATTCAGTATATTACCTAATGTTTACTCGTTGGCTATCTCTTGTTTTGGAAGAGAAGGACAGCTTGAGTTAATGGAAGATATGGCAAAGGAAATGGCTTCAAGAGGTGTTCATGTCTCTTCTAAAACTGCTAATGCTTTTGTTTTGTATTATAGCATTTTTGGTTCTTTGAAAGACATGGAGCATGCTTATGGGCGGTTAAAGAGATCGAGATTTATGATAGAGAGGGAAGTGATTCGGGCCATGGCCTCTGCATATACAAGGGACAGACAATTCTATGAATTGGGTGAGTTCCTAAGAGATGTTGGTCTAGGTAGGAAAGATGTCGGAAATCTGATATGGAACCTTTTGTTACTTTCTTATGCTGCAAATTTCAAGATGAAAAGCTTGCAGAAAGAATTTCTACAAATGGTGGAATCTGGGTTCCGTCCTGATATTACAACCTTTAATATTCGTGCTTTAGCCTTCTCAAGGATGGCTTTGTTCTGGGATCTTCACCTTAGCATTGAACATATGGAACATGAGAGGGTCATTCCTGATCTAGTTACTTTTGGGTGTGTAGTTGATGCATACTTGGATAGAGGGCTTGGAAGGAACTTGGACTTTGTTCTGAACAAAATGAACTTGGATCATTCTCCAATGTTGTTGACAGATCCGTTTGTGTATGAGGCCTTAGGTAAAGGGGACTTTCAAATGAGTTCTGAAGCATTTTTGGAGTTTAAGACACAACAAAGGAAATGGACTTACCGTGCTTTGATACAAAAGTATCTCAAGAAACATTACAGAAGGGACCAGATATTTTGGAACTACTAA 1251 0.3861 MEINSLTLPSSRMSILLKDSPSGAPQQHNKIIWRRNEKRAFDGTHSSVDSSSLVQNNSRKRMFPQSDGVFHDTKVDVSMPKQTSLCVLMLHYTENGLFPQAQTTWEQLLYSSFVPSVEFISRLFDAYAKHGKFDEVVNILRYVDMRKFSILPNVYSLAISCFGREGQLELMEDMAKEMASRGVHVSSKTANAFVLYYSIFGSLKDMEHAYGRLKRSRFMIEREVIRAMASAYTRDRQFYELGEFLRDVGLGRKDVGNLIWNLLLLSYAANFKMKSLQKEFLQMVESGFRPDITTFNIRALAFSRMALFWDLHLSIEHMEHERVIPDLVTFGCVVDAYLDRGLGRNLDFVLNKMNLDHSPMLLTDPFVYEALGKGDFQMSSEAFLEFKTQQRKWTYRALIQKYLKKHYRRDQIFWNY 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01446 416 PANTHER OS08G0520200 PROTEIN 33 411 - -
Viun10g01446 416 NCBIfam pentatricopeptide repeat 154 185 IPR002885 -
Viun10g01446 416 Pfam PPR repeat 155 183 IPR002885 -
Viun10g01446 416 Pfam PPR repeat 123 141 IPR002885 -
Viun10g01446 416 Gene3D Tetratricopeptide repeat domain 51 245 IPR011990 GO:0005515
Viun10g01446 416 Gene3D Tetratricopeptide repeat domain 252 412 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01446 - - gmx:100818684 677.552